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The first complete mitochondrial genome in the family Attevidae (Attevaaurea) of the order Lepidoptera

The superfamily Yponomeutoidea, one of the early-derived groups in the order Lepidoptera, consists of 11 families. However, mitochondrial genome (mitogenome) sequences, popularly used for phylogeny and evolutionary tracing, are available for only seven species across six genera and five families. Th...

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Autores principales: Jeong, Jun Seong, Park, Jeong Sun, Sohn, Jae-Cheon, Kim, Min Jee, Oh, Hyung Keun, Kim, Iksoo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9848453/
https://www.ncbi.nlm.nih.gov/pubmed/36761539
http://dx.doi.org/10.3897/BDJ.10.e89982
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author Jeong, Jun Seong
Park, Jeong Sun
Sohn, Jae-Cheon
Kim, Min Jee
Oh, Hyung Keun
Kim, Iksoo
author_facet Jeong, Jun Seong
Park, Jeong Sun
Sohn, Jae-Cheon
Kim, Min Jee
Oh, Hyung Keun
Kim, Iksoo
author_sort Jeong, Jun Seong
collection PubMed
description The superfamily Yponomeutoidea, one of the early-derived groups in the order Lepidoptera, consists of 11 families. However, mitochondrial genome (mitogenome) sequences, popularly used for phylogeny and evolutionary tracing, are available for only seven species across six genera and five families. Thus, a larger variety of mitogenome sequences in Yponomeutoidea are required to improve our understanding of lepidopteran phylogeny and genomic evolution. In this study, we present the complete mitogenome of Attevaaurea (Fitch, 1856), the first species in the family Attevidae (superfamily Yponomeutoidea, order Lepidoptera) to be sequenced. The complete mitogenome comprises 16,329 bp and contains a typical set of genes and one non-coding region. Within Yponomeutoidea, the mitogenome of A.aurea has a unique trnI-trnM-trnQ arrangement at the A + T-rich region and ND2 junction and trnA-ND3 arrangement at the trnG and trnR junction. Twelve of the 13 protein-coding genes (PCGs) of A.aurea have a typical ATN starting codon, whereas COI has the atypical CGA codon, which is frequently found in the starting region of lepidopteran COI. Phylogenetic analyses, based on the concatenated sequences of 13 PCGs and two rRNA genes, using the Maximum Likelihood method, revealed a sister relationship between Attevidae and Praydidae with moderately low nodal support (bootstrap support = 64%).
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spelling pubmed-98484532023-02-08 The first complete mitochondrial genome in the family Attevidae (Attevaaurea) of the order Lepidoptera Jeong, Jun Seong Park, Jeong Sun Sohn, Jae-Cheon Kim, Min Jee Oh, Hyung Keun Kim, Iksoo Biodivers Data J Research Article The superfamily Yponomeutoidea, one of the early-derived groups in the order Lepidoptera, consists of 11 families. However, mitochondrial genome (mitogenome) sequences, popularly used for phylogeny and evolutionary tracing, are available for only seven species across six genera and five families. Thus, a larger variety of mitogenome sequences in Yponomeutoidea are required to improve our understanding of lepidopteran phylogeny and genomic evolution. In this study, we present the complete mitogenome of Attevaaurea (Fitch, 1856), the first species in the family Attevidae (superfamily Yponomeutoidea, order Lepidoptera) to be sequenced. The complete mitogenome comprises 16,329 bp and contains a typical set of genes and one non-coding region. Within Yponomeutoidea, the mitogenome of A.aurea has a unique trnI-trnM-trnQ arrangement at the A + T-rich region and ND2 junction and trnA-ND3 arrangement at the trnG and trnR junction. Twelve of the 13 protein-coding genes (PCGs) of A.aurea have a typical ATN starting codon, whereas COI has the atypical CGA codon, which is frequently found in the starting region of lepidopteran COI. Phylogenetic analyses, based on the concatenated sequences of 13 PCGs and two rRNA genes, using the Maximum Likelihood method, revealed a sister relationship between Attevidae and Praydidae with moderately low nodal support (bootstrap support = 64%). Pensoft Publishers 2022-09-12 /pmc/articles/PMC9848453/ /pubmed/36761539 http://dx.doi.org/10.3897/BDJ.10.e89982 Text en Jun Seong Jeong, Jeong Sun Park, Jae-Cheon Sohn, Min Jee Kim, Hyung Keun Oh, Iksoo Kim https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Jeong, Jun Seong
Park, Jeong Sun
Sohn, Jae-Cheon
Kim, Min Jee
Oh, Hyung Keun
Kim, Iksoo
The first complete mitochondrial genome in the family Attevidae (Attevaaurea) of the order Lepidoptera
title The first complete mitochondrial genome in the family Attevidae (Attevaaurea) of the order Lepidoptera
title_full The first complete mitochondrial genome in the family Attevidae (Attevaaurea) of the order Lepidoptera
title_fullStr The first complete mitochondrial genome in the family Attevidae (Attevaaurea) of the order Lepidoptera
title_full_unstemmed The first complete mitochondrial genome in the family Attevidae (Attevaaurea) of the order Lepidoptera
title_short The first complete mitochondrial genome in the family Attevidae (Attevaaurea) of the order Lepidoptera
title_sort first complete mitochondrial genome in the family attevidae (attevaaurea) of the order lepidoptera
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9848453/
https://www.ncbi.nlm.nih.gov/pubmed/36761539
http://dx.doi.org/10.3897/BDJ.10.e89982
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