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Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus

This study provides the first attempt to investigate the molecular diversity of South Caucasian freshwater molluscs (Mollusca, Gastropoda) and lay down the first bricks to build up a DNA-barcode library. In total, 289 COI barcode sequences were obtained from 33 morpho-species belonging to 24 mollusc...

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Autores principales: Bikashvili, Ani, Kachlishvili, Nino, Japoshvili, Bella, Mumladze, Levan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9848562/
https://www.ncbi.nlm.nih.gov/pubmed/36761591
http://dx.doi.org/10.3897/BDJ.10.e84887
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author Bikashvili, Ani
Kachlishvili, Nino
Japoshvili, Bella
Mumladze, Levan
author_facet Bikashvili, Ani
Kachlishvili, Nino
Japoshvili, Bella
Mumladze, Levan
author_sort Bikashvili, Ani
collection PubMed
description This study provides the first attempt to investigate the molecular diversity of South Caucasian freshwater molluscs (Mollusca, Gastropoda) and lay down the first bricks to build up a DNA-barcode library. In total, 289 COI barcode sequences were obtained from 33 morpho-species belonging to 24 molluscan genera and 10 families that represent nearly 30% of known freshwater molluscan diversity of the South Caucasus region. DNA barcodes were analysed by means of the Barcode Index Number (BIN) and the other tools available in BOLD Systems. Results showed that the knowledge of freshwater molluscs diversity in the South Caucasus is far from comprehensive. For the studied 33 morpho-species, 289 barcodes were clustered into 40 BINs, from which unique BINs were defined for 12 species and five species were characterised with more than a single BIN. From the studied taxa, 60% were characterised larger than 2.2% sequence divergence indicating high genetic variation or cryptic diversity. Within our limited taxonomic coverage, we found one new species for the Republic of Georgia (Galbaschirazensis) and at least three undescribed species belonging to the genera Stagnicola, Segmentina and Anisus. Uniqueness and high molecular diversity of the studied species emphasise the need for further intensive morphological and molecular investigations of the South Caucasian freshwater molluscan fauna.
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spelling pubmed-98485622023-02-08 Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus Bikashvili, Ani Kachlishvili, Nino Japoshvili, Bella Mumladze, Levan Biodivers Data J Research Article This study provides the first attempt to investigate the molecular diversity of South Caucasian freshwater molluscs (Mollusca, Gastropoda) and lay down the first bricks to build up a DNA-barcode library. In total, 289 COI barcode sequences were obtained from 33 morpho-species belonging to 24 molluscan genera and 10 families that represent nearly 30% of known freshwater molluscan diversity of the South Caucasus region. DNA barcodes were analysed by means of the Barcode Index Number (BIN) and the other tools available in BOLD Systems. Results showed that the knowledge of freshwater molluscs diversity in the South Caucasus is far from comprehensive. For the studied 33 morpho-species, 289 barcodes were clustered into 40 BINs, from which unique BINs were defined for 12 species and five species were characterised with more than a single BIN. From the studied taxa, 60% were characterised larger than 2.2% sequence divergence indicating high genetic variation or cryptic diversity. Within our limited taxonomic coverage, we found one new species for the Republic of Georgia (Galbaschirazensis) and at least three undescribed species belonging to the genera Stagnicola, Segmentina and Anisus. Uniqueness and high molecular diversity of the studied species emphasise the need for further intensive morphological and molecular investigations of the South Caucasian freshwater molluscan fauna. Pensoft Publishers 2022-09-13 /pmc/articles/PMC9848562/ /pubmed/36761591 http://dx.doi.org/10.3897/BDJ.10.e84887 Text en Ani Bikashvili, Nino Kachlishvili, Bella Japoshvili, Levan Mumladze https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Bikashvili, Ani
Kachlishvili, Nino
Japoshvili, Bella
Mumladze, Levan
Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus
title Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus
title_full Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus
title_fullStr Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus
title_full_unstemmed Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus
title_short Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus
title_sort species diversity and dna barcode library of freshwater molluscs of south caucasus
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9848562/
https://www.ncbi.nlm.nih.gov/pubmed/36761591
http://dx.doi.org/10.3897/BDJ.10.e84887
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