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Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus
This study provides the first attempt to investigate the molecular diversity of South Caucasian freshwater molluscs (Mollusca, Gastropoda) and lay down the first bricks to build up a DNA-barcode library. In total, 289 COI barcode sequences were obtained from 33 morpho-species belonging to 24 mollusc...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Pensoft Publishers
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9848562/ https://www.ncbi.nlm.nih.gov/pubmed/36761591 http://dx.doi.org/10.3897/BDJ.10.e84887 |
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author | Bikashvili, Ani Kachlishvili, Nino Japoshvili, Bella Mumladze, Levan |
author_facet | Bikashvili, Ani Kachlishvili, Nino Japoshvili, Bella Mumladze, Levan |
author_sort | Bikashvili, Ani |
collection | PubMed |
description | This study provides the first attempt to investigate the molecular diversity of South Caucasian freshwater molluscs (Mollusca, Gastropoda) and lay down the first bricks to build up a DNA-barcode library. In total, 289 COI barcode sequences were obtained from 33 morpho-species belonging to 24 molluscan genera and 10 families that represent nearly 30% of known freshwater molluscan diversity of the South Caucasus region. DNA barcodes were analysed by means of the Barcode Index Number (BIN) and the other tools available in BOLD Systems. Results showed that the knowledge of freshwater molluscs diversity in the South Caucasus is far from comprehensive. For the studied 33 morpho-species, 289 barcodes were clustered into 40 BINs, from which unique BINs were defined for 12 species and five species were characterised with more than a single BIN. From the studied taxa, 60% were characterised larger than 2.2% sequence divergence indicating high genetic variation or cryptic diversity. Within our limited taxonomic coverage, we found one new species for the Republic of Georgia (Galbaschirazensis) and at least three undescribed species belonging to the genera Stagnicola, Segmentina and Anisus. Uniqueness and high molecular diversity of the studied species emphasise the need for further intensive morphological and molecular investigations of the South Caucasian freshwater molluscan fauna. |
format | Online Article Text |
id | pubmed-9848562 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Pensoft Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-98485622023-02-08 Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus Bikashvili, Ani Kachlishvili, Nino Japoshvili, Bella Mumladze, Levan Biodivers Data J Research Article This study provides the first attempt to investigate the molecular diversity of South Caucasian freshwater molluscs (Mollusca, Gastropoda) and lay down the first bricks to build up a DNA-barcode library. In total, 289 COI barcode sequences were obtained from 33 morpho-species belonging to 24 molluscan genera and 10 families that represent nearly 30% of known freshwater molluscan diversity of the South Caucasus region. DNA barcodes were analysed by means of the Barcode Index Number (BIN) and the other tools available in BOLD Systems. Results showed that the knowledge of freshwater molluscs diversity in the South Caucasus is far from comprehensive. For the studied 33 morpho-species, 289 barcodes were clustered into 40 BINs, from which unique BINs were defined for 12 species and five species were characterised with more than a single BIN. From the studied taxa, 60% were characterised larger than 2.2% sequence divergence indicating high genetic variation or cryptic diversity. Within our limited taxonomic coverage, we found one new species for the Republic of Georgia (Galbaschirazensis) and at least three undescribed species belonging to the genera Stagnicola, Segmentina and Anisus. Uniqueness and high molecular diversity of the studied species emphasise the need for further intensive morphological and molecular investigations of the South Caucasian freshwater molluscan fauna. Pensoft Publishers 2022-09-13 /pmc/articles/PMC9848562/ /pubmed/36761591 http://dx.doi.org/10.3897/BDJ.10.e84887 Text en Ani Bikashvili, Nino Kachlishvili, Bella Japoshvili, Levan Mumladze https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Bikashvili, Ani Kachlishvili, Nino Japoshvili, Bella Mumladze, Levan Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus |
title | Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus |
title_full | Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus |
title_fullStr | Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus |
title_full_unstemmed | Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus |
title_short | Species diversity and DNA barcode library of freshwater Molluscs of South Caucasus |
title_sort | species diversity and dna barcode library of freshwater molluscs of south caucasus |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9848562/ https://www.ncbi.nlm.nih.gov/pubmed/36761591 http://dx.doi.org/10.3897/BDJ.10.e84887 |
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