Cargando…
ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations
ENCD (http://www.bio-server.cn/ENCD/) is a manually curated database that provides comprehensive experimentally supported associations among endocrine system diseases (ESDs) and long non-coding ribonucleic acid (lncRNAs). The incidence of ESDs has increased in recent years, often accompanying other...
Autores principales: | , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9849115/ https://www.ncbi.nlm.nih.gov/pubmed/36653322 http://dx.doi.org/10.1093/database/baac113 |
_version_ | 1784871873296728064 |
---|---|
author | Hao, Ming Qi, Yue Xu, Rongji Zhao, Kangqi Li, Mingqing Shan, Yongyan Xia, Tian Yang, Kun Hasi, Wuyang Zhang, Cong Li, Daowei Wang, Yi Wang, Peng Kuang, Hongyu |
author_facet | Hao, Ming Qi, Yue Xu, Rongji Zhao, Kangqi Li, Mingqing Shan, Yongyan Xia, Tian Yang, Kun Hasi, Wuyang Zhang, Cong Li, Daowei Wang, Yi Wang, Peng Kuang, Hongyu |
author_sort | Hao, Ming |
collection | PubMed |
description | ENCD (http://www.bio-server.cn/ENCD/) is a manually curated database that provides comprehensive experimentally supported associations among endocrine system diseases (ESDs) and long non-coding ribonucleic acid (lncRNAs). The incidence of ESDs has increased in recent years, often accompanying other chronic diseases, and can lead to disability. A growing body of research suggests that lncRNA plays an important role in the progression and metastasis of ESDs. However, there are no resources focused on collecting and integrating the latest and experimentally supported lncRNA–ESD associations. Hence, we developed an ENCD database that consists of 1379 associations between 35 ESDs and 501 lncRNAs in 12 human tissues curated from literature. By using ENCD, users can explore the genetic data for diseases corresponding to the body parts of interest as well as study the lncRNA regulating mechanism for ESDs. ENCD also provides a flexible tool to visualize a disease- or gene-centric regulatory network. In addition, ENCD offers a submission page for researchers to submit their newly discovered endocrine disorders-genetic data entries online. Collectively, ENCD will provide comprehensive insights for investigating the ESDs associated with lncRNAs. Database URL http://www.bio-server.cn/ENCD |
format | Online Article Text |
id | pubmed-9849115 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-98491152023-01-20 ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations Hao, Ming Qi, Yue Xu, Rongji Zhao, Kangqi Li, Mingqing Shan, Yongyan Xia, Tian Yang, Kun Hasi, Wuyang Zhang, Cong Li, Daowei Wang, Yi Wang, Peng Kuang, Hongyu Database (Oxford) Original Article ENCD (http://www.bio-server.cn/ENCD/) is a manually curated database that provides comprehensive experimentally supported associations among endocrine system diseases (ESDs) and long non-coding ribonucleic acid (lncRNAs). The incidence of ESDs has increased in recent years, often accompanying other chronic diseases, and can lead to disability. A growing body of research suggests that lncRNA plays an important role in the progression and metastasis of ESDs. However, there are no resources focused on collecting and integrating the latest and experimentally supported lncRNA–ESD associations. Hence, we developed an ENCD database that consists of 1379 associations between 35 ESDs and 501 lncRNAs in 12 human tissues curated from literature. By using ENCD, users can explore the genetic data for diseases corresponding to the body parts of interest as well as study the lncRNA regulating mechanism for ESDs. ENCD also provides a flexible tool to visualize a disease- or gene-centric regulatory network. In addition, ENCD offers a submission page for researchers to submit their newly discovered endocrine disorders-genetic data entries online. Collectively, ENCD will provide comprehensive insights for investigating the ESDs associated with lncRNAs. Database URL http://www.bio-server.cn/ENCD Oxford University Press 2023-01-19 /pmc/articles/PMC9849115/ /pubmed/36653322 http://dx.doi.org/10.1093/database/baac113 Text en © The Author(s) 2023. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Hao, Ming Qi, Yue Xu, Rongji Zhao, Kangqi Li, Mingqing Shan, Yongyan Xia, Tian Yang, Kun Hasi, Wuyang Zhang, Cong Li, Daowei Wang, Yi Wang, Peng Kuang, Hongyu ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations |
title | ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations |
title_full | ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations |
title_fullStr | ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations |
title_full_unstemmed | ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations |
title_short | ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations |
title_sort | encd: a manually curated database of experimentally supported endocrine system disease and lncrna associations |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9849115/ https://www.ncbi.nlm.nih.gov/pubmed/36653322 http://dx.doi.org/10.1093/database/baac113 |
work_keys_str_mv | AT haoming encdamanuallycurateddatabaseofexperimentallysupportedendocrinesystemdiseaseandlncrnaassociations AT qiyue encdamanuallycurateddatabaseofexperimentallysupportedendocrinesystemdiseaseandlncrnaassociations AT xurongji encdamanuallycurateddatabaseofexperimentallysupportedendocrinesystemdiseaseandlncrnaassociations AT zhaokangqi encdamanuallycurateddatabaseofexperimentallysupportedendocrinesystemdiseaseandlncrnaassociations AT limingqing encdamanuallycurateddatabaseofexperimentallysupportedendocrinesystemdiseaseandlncrnaassociations AT shanyongyan encdamanuallycurateddatabaseofexperimentallysupportedendocrinesystemdiseaseandlncrnaassociations AT xiatian encdamanuallycurateddatabaseofexperimentallysupportedendocrinesystemdiseaseandlncrnaassociations AT yangkun encdamanuallycurateddatabaseofexperimentallysupportedendocrinesystemdiseaseandlncrnaassociations AT hasiwuyang encdamanuallycurateddatabaseofexperimentallysupportedendocrinesystemdiseaseandlncrnaassociations AT zhangcong encdamanuallycurateddatabaseofexperimentallysupportedendocrinesystemdiseaseandlncrnaassociations AT lidaowei encdamanuallycurateddatabaseofexperimentallysupportedendocrinesystemdiseaseandlncrnaassociations AT wangyi encdamanuallycurateddatabaseofexperimentallysupportedendocrinesystemdiseaseandlncrnaassociations AT wangpeng encdamanuallycurateddatabaseofexperimentallysupportedendocrinesystemdiseaseandlncrnaassociations AT kuanghongyu encdamanuallycurateddatabaseofexperimentallysupportedendocrinesystemdiseaseandlncrnaassociations |