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ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations

ENCD (http://www.bio-server.cn/ENCD/) is a manually curated database that provides comprehensive experimentally supported associations among endocrine system diseases (ESDs) and long non-coding ribonucleic acid (lncRNAs). The incidence of ESDs has increased in recent years, often accompanying other...

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Autores principales: Hao, Ming, Qi, Yue, Xu, Rongji, Zhao, Kangqi, Li, Mingqing, Shan, Yongyan, Xia, Tian, Yang, Kun, Hasi, Wuyang, Zhang, Cong, Li, Daowei, Wang, Yi, Wang, Peng, Kuang, Hongyu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9849115/
https://www.ncbi.nlm.nih.gov/pubmed/36653322
http://dx.doi.org/10.1093/database/baac113
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author Hao, Ming
Qi, Yue
Xu, Rongji
Zhao, Kangqi
Li, Mingqing
Shan, Yongyan
Xia, Tian
Yang, Kun
Hasi, Wuyang
Zhang, Cong
Li, Daowei
Wang, Yi
Wang, Peng
Kuang, Hongyu
author_facet Hao, Ming
Qi, Yue
Xu, Rongji
Zhao, Kangqi
Li, Mingqing
Shan, Yongyan
Xia, Tian
Yang, Kun
Hasi, Wuyang
Zhang, Cong
Li, Daowei
Wang, Yi
Wang, Peng
Kuang, Hongyu
author_sort Hao, Ming
collection PubMed
description ENCD (http://www.bio-server.cn/ENCD/) is a manually curated database that provides comprehensive experimentally supported associations among endocrine system diseases (ESDs) and long non-coding ribonucleic acid (lncRNAs). The incidence of ESDs has increased in recent years, often accompanying other chronic diseases, and can lead to disability. A growing body of research suggests that lncRNA plays an important role in the progression and metastasis of ESDs. However, there are no resources focused on collecting and integrating the latest and experimentally supported lncRNA–ESD associations. Hence, we developed an ENCD database that consists of 1379 associations between 35 ESDs and 501 lncRNAs in 12 human tissues curated from literature. By using ENCD, users can explore the genetic data for diseases corresponding to the body parts of interest as well as study the lncRNA regulating mechanism for ESDs. ENCD also provides a flexible tool to visualize a disease- or gene-centric regulatory network. In addition, ENCD offers a submission page for researchers to submit their newly discovered endocrine disorders-genetic data entries online. Collectively, ENCD will provide comprehensive insights for investigating the ESDs associated with lncRNAs. Database URL http://www.bio-server.cn/ENCD
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spelling pubmed-98491152023-01-20 ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations Hao, Ming Qi, Yue Xu, Rongji Zhao, Kangqi Li, Mingqing Shan, Yongyan Xia, Tian Yang, Kun Hasi, Wuyang Zhang, Cong Li, Daowei Wang, Yi Wang, Peng Kuang, Hongyu Database (Oxford) Original Article ENCD (http://www.bio-server.cn/ENCD/) is a manually curated database that provides comprehensive experimentally supported associations among endocrine system diseases (ESDs) and long non-coding ribonucleic acid (lncRNAs). The incidence of ESDs has increased in recent years, often accompanying other chronic diseases, and can lead to disability. A growing body of research suggests that lncRNA plays an important role in the progression and metastasis of ESDs. However, there are no resources focused on collecting and integrating the latest and experimentally supported lncRNA–ESD associations. Hence, we developed an ENCD database that consists of 1379 associations between 35 ESDs and 501 lncRNAs in 12 human tissues curated from literature. By using ENCD, users can explore the genetic data for diseases corresponding to the body parts of interest as well as study the lncRNA regulating mechanism for ESDs. ENCD also provides a flexible tool to visualize a disease- or gene-centric regulatory network. In addition, ENCD offers a submission page for researchers to submit their newly discovered endocrine disorders-genetic data entries online. Collectively, ENCD will provide comprehensive insights for investigating the ESDs associated with lncRNAs. Database URL http://www.bio-server.cn/ENCD Oxford University Press 2023-01-19 /pmc/articles/PMC9849115/ /pubmed/36653322 http://dx.doi.org/10.1093/database/baac113 Text en © The Author(s) 2023. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Hao, Ming
Qi, Yue
Xu, Rongji
Zhao, Kangqi
Li, Mingqing
Shan, Yongyan
Xia, Tian
Yang, Kun
Hasi, Wuyang
Zhang, Cong
Li, Daowei
Wang, Yi
Wang, Peng
Kuang, Hongyu
ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations
title ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations
title_full ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations
title_fullStr ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations
title_full_unstemmed ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations
title_short ENCD: a manually curated database of experimentally supported endocrine system disease and lncRNA associations
title_sort encd: a manually curated database of experimentally supported endocrine system disease and lncrna associations
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9849115/
https://www.ncbi.nlm.nih.gov/pubmed/36653322
http://dx.doi.org/10.1093/database/baac113
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