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Longitudinal individual predictions from irregular repeated measurements data
Intensive longitudinal data can be used to explore important associations and patterns between various types of inputs and outcomes. Nonlinear relations and irregular measurement occasions can pose problems to develop an accurate model for these kinds of data. This paper focuses on the development,...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9849229/ https://www.ncbi.nlm.nih.gov/pubmed/36653404 http://dx.doi.org/10.1038/s41598-022-26933-1 |
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author | Eekhout, Iris van Buuren, Stef Visser, Bram Bink, Marco C. A. M. Huisman, Abe |
author_facet | Eekhout, Iris van Buuren, Stef Visser, Bram Bink, Marco C. A. M. Huisman, Abe |
author_sort | Eekhout, Iris |
collection | PubMed |
description | Intensive longitudinal data can be used to explore important associations and patterns between various types of inputs and outcomes. Nonlinear relations and irregular measurement occasions can pose problems to develop an accurate model for these kinds of data. This paper focuses on the development, fitting and evaluation of a prediction model with irregular intensive longitudinal data. A three-step process for developing a prediction tool for (daily) monitoring and prediction is outlined and illustrated for intensive weight measurements in piglets. Step 1 addresses a nonlinear relation in the data by developing and applying a normalizing transformation. Step 2 addresses the intermittent nature of the time points by aligning the measurement times to a common time grid with a broken-stick model. Step 3 addresses the prediction problem by selecting and evaluating inputs and covariates in the model to obtain accurate predictions. The final model predicts future outcomes accurately, while allowing for nonlinearities between input and output and for different measurement histories of individuals. The methodology described can be used to develop a tool to deal with intensive irregular longitudinal data that uses the available information in an optimal way. The resulting tool demonstrated to perform well for piglet weight prediction and can be adapted to many different applications. |
format | Online Article Text |
id | pubmed-9849229 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-98492292023-01-20 Longitudinal individual predictions from irregular repeated measurements data Eekhout, Iris van Buuren, Stef Visser, Bram Bink, Marco C. A. M. Huisman, Abe Sci Rep Article Intensive longitudinal data can be used to explore important associations and patterns between various types of inputs and outcomes. Nonlinear relations and irregular measurement occasions can pose problems to develop an accurate model for these kinds of data. This paper focuses on the development, fitting and evaluation of a prediction model with irregular intensive longitudinal data. A three-step process for developing a prediction tool for (daily) monitoring and prediction is outlined and illustrated for intensive weight measurements in piglets. Step 1 addresses a nonlinear relation in the data by developing and applying a normalizing transformation. Step 2 addresses the intermittent nature of the time points by aligning the measurement times to a common time grid with a broken-stick model. Step 3 addresses the prediction problem by selecting and evaluating inputs and covariates in the model to obtain accurate predictions. The final model predicts future outcomes accurately, while allowing for nonlinearities between input and output and for different measurement histories of individuals. The methodology described can be used to develop a tool to deal with intensive irregular longitudinal data that uses the available information in an optimal way. The resulting tool demonstrated to perform well for piglet weight prediction and can be adapted to many different applications. Nature Publishing Group UK 2023-01-18 /pmc/articles/PMC9849229/ /pubmed/36653404 http://dx.doi.org/10.1038/s41598-022-26933-1 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Eekhout, Iris van Buuren, Stef Visser, Bram Bink, Marco C. A. M. Huisman, Abe Longitudinal individual predictions from irregular repeated measurements data |
title | Longitudinal individual predictions from irregular repeated measurements data |
title_full | Longitudinal individual predictions from irregular repeated measurements data |
title_fullStr | Longitudinal individual predictions from irregular repeated measurements data |
title_full_unstemmed | Longitudinal individual predictions from irregular repeated measurements data |
title_short | Longitudinal individual predictions from irregular repeated measurements data |
title_sort | longitudinal individual predictions from irregular repeated measurements data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9849229/ https://www.ncbi.nlm.nih.gov/pubmed/36653404 http://dx.doi.org/10.1038/s41598-022-26933-1 |
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