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Artificial intelligence-based locoregional markers of brain peritumoral microenvironment
In malignant primary brain tumors, cancer cells infiltrate into the peritumoral brain structures which results in inevitable recurrence. Quantitative assessment of infiltrative heterogeneity in the peritumoral region, the area where biopsy or resection can be hazardous, is important for clinical dec...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9849348/ https://www.ncbi.nlm.nih.gov/pubmed/36653382 http://dx.doi.org/10.1038/s41598-022-26448-9 |
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author | Riahi Samani, Zahra Parker, Drew Akbari, Hamed Wolf, Ronald L. Brem, Steven Bakas, Spyridon Verma, Ragini |
author_facet | Riahi Samani, Zahra Parker, Drew Akbari, Hamed Wolf, Ronald L. Brem, Steven Bakas, Spyridon Verma, Ragini |
author_sort | Riahi Samani, Zahra |
collection | PubMed |
description | In malignant primary brain tumors, cancer cells infiltrate into the peritumoral brain structures which results in inevitable recurrence. Quantitative assessment of infiltrative heterogeneity in the peritumoral region, the area where biopsy or resection can be hazardous, is important for clinical decision making. Here, we derive a novel set of Artificial intelligence (AI)-based markers capturing the heterogeneity of tumor infiltration, by characterizing free water movement restriction in the peritumoral region using Diffusion Tensor Imaging (DTI)-based free water volume fraction maps. We leverage the differences in the peritumoral region of metastasis and glioblastomas, the former consisting of vasogenic versus the latter containing infiltrative edema, to extract a voxel-wise deep learning-based peritumoral microenvironment index (PMI). Descriptive characteristics of locoregional hubs of uniformly high PMI values are then extracted as AI-based markers to capture distinct aspects of infiltrative heterogeneity. The proposed markers are utilized to stratify patients’ survival and IDH1 mutation status on a population of 275 adult-type diffuse gliomas (CNS WHO grade 4). Our results show significant differences in the proposed markers between patients with different overall survival and IDH1 mutation status (t test, Wilcoxon rank sum test, linear regression; p < 0.01). Clustering of patients using the proposed markers reveals distinct survival groups (logrank; p < 10(−5), Cox hazard ratio = 1.82; p < 0.005). Our findings provide a panel of markers as surrogates of infiltration that might capture novel insight about underlying biology of peritumoral microstructural heterogeneity, providing potential biomarkers of prognosis pertaining to survival and molecular stratification, with applicability in clinical decision making. |
format | Online Article Text |
id | pubmed-9849348 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-98493482023-01-20 Artificial intelligence-based locoregional markers of brain peritumoral microenvironment Riahi Samani, Zahra Parker, Drew Akbari, Hamed Wolf, Ronald L. Brem, Steven Bakas, Spyridon Verma, Ragini Sci Rep Article In malignant primary brain tumors, cancer cells infiltrate into the peritumoral brain structures which results in inevitable recurrence. Quantitative assessment of infiltrative heterogeneity in the peritumoral region, the area where biopsy or resection can be hazardous, is important for clinical decision making. Here, we derive a novel set of Artificial intelligence (AI)-based markers capturing the heterogeneity of tumor infiltration, by characterizing free water movement restriction in the peritumoral region using Diffusion Tensor Imaging (DTI)-based free water volume fraction maps. We leverage the differences in the peritumoral region of metastasis and glioblastomas, the former consisting of vasogenic versus the latter containing infiltrative edema, to extract a voxel-wise deep learning-based peritumoral microenvironment index (PMI). Descriptive characteristics of locoregional hubs of uniformly high PMI values are then extracted as AI-based markers to capture distinct aspects of infiltrative heterogeneity. The proposed markers are utilized to stratify patients’ survival and IDH1 mutation status on a population of 275 adult-type diffuse gliomas (CNS WHO grade 4). Our results show significant differences in the proposed markers between patients with different overall survival and IDH1 mutation status (t test, Wilcoxon rank sum test, linear regression; p < 0.01). Clustering of patients using the proposed markers reveals distinct survival groups (logrank; p < 10(−5), Cox hazard ratio = 1.82; p < 0.005). Our findings provide a panel of markers as surrogates of infiltration that might capture novel insight about underlying biology of peritumoral microstructural heterogeneity, providing potential biomarkers of prognosis pertaining to survival and molecular stratification, with applicability in clinical decision making. Nature Publishing Group UK 2023-01-18 /pmc/articles/PMC9849348/ /pubmed/36653382 http://dx.doi.org/10.1038/s41598-022-26448-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Riahi Samani, Zahra Parker, Drew Akbari, Hamed Wolf, Ronald L. Brem, Steven Bakas, Spyridon Verma, Ragini Artificial intelligence-based locoregional markers of brain peritumoral microenvironment |
title | Artificial intelligence-based locoregional markers of brain peritumoral microenvironment |
title_full | Artificial intelligence-based locoregional markers of brain peritumoral microenvironment |
title_fullStr | Artificial intelligence-based locoregional markers of brain peritumoral microenvironment |
title_full_unstemmed | Artificial intelligence-based locoregional markers of brain peritumoral microenvironment |
title_short | Artificial intelligence-based locoregional markers of brain peritumoral microenvironment |
title_sort | artificial intelligence-based locoregional markers of brain peritumoral microenvironment |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9849348/ https://www.ncbi.nlm.nih.gov/pubmed/36653382 http://dx.doi.org/10.1038/s41598-022-26448-9 |
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