Cargando…

Artificial intelligence-based locoregional markers of brain peritumoral microenvironment

In malignant primary brain tumors, cancer cells infiltrate into the peritumoral brain structures which results in inevitable recurrence. Quantitative assessment of infiltrative heterogeneity in the peritumoral region, the area where biopsy or resection can be hazardous, is important for clinical dec...

Descripción completa

Detalles Bibliográficos
Autores principales: Riahi Samani, Zahra, Parker, Drew, Akbari, Hamed, Wolf, Ronald L., Brem, Steven, Bakas, Spyridon, Verma, Ragini
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9849348/
https://www.ncbi.nlm.nih.gov/pubmed/36653382
http://dx.doi.org/10.1038/s41598-022-26448-9
_version_ 1784871940149739520
author Riahi Samani, Zahra
Parker, Drew
Akbari, Hamed
Wolf, Ronald L.
Brem, Steven
Bakas, Spyridon
Verma, Ragini
author_facet Riahi Samani, Zahra
Parker, Drew
Akbari, Hamed
Wolf, Ronald L.
Brem, Steven
Bakas, Spyridon
Verma, Ragini
author_sort Riahi Samani, Zahra
collection PubMed
description In malignant primary brain tumors, cancer cells infiltrate into the peritumoral brain structures which results in inevitable recurrence. Quantitative assessment of infiltrative heterogeneity in the peritumoral region, the area where biopsy or resection can be hazardous, is important for clinical decision making. Here, we derive a novel set of Artificial intelligence (AI)-based markers capturing the heterogeneity of tumor infiltration, by characterizing free water movement restriction in the peritumoral region using Diffusion Tensor Imaging (DTI)-based free water volume fraction maps. We leverage the differences in the peritumoral region of metastasis and glioblastomas, the former consisting of vasogenic versus the latter containing infiltrative edema, to extract a voxel-wise deep learning-based peritumoral microenvironment index (PMI). Descriptive characteristics of locoregional hubs of uniformly high PMI values are then extracted as AI-based markers to capture distinct aspects of infiltrative heterogeneity. The proposed markers are utilized to stratify patients’ survival and IDH1 mutation status on a population of 275 adult-type diffuse gliomas (CNS WHO grade 4). Our results show significant differences in the proposed markers between patients with different overall survival and IDH1 mutation status (t test, Wilcoxon rank sum test, linear regression; p < 0.01). Clustering of patients using the proposed markers reveals distinct survival groups (logrank; p < 10(−5), Cox hazard ratio = 1.82; p < 0.005). Our findings provide a panel of markers as surrogates of infiltration that might capture novel insight about underlying biology of peritumoral microstructural heterogeneity, providing potential biomarkers of prognosis pertaining to survival and molecular stratification, with applicability in clinical decision making.
format Online
Article
Text
id pubmed-9849348
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-98493482023-01-20 Artificial intelligence-based locoregional markers of brain peritumoral microenvironment Riahi Samani, Zahra Parker, Drew Akbari, Hamed Wolf, Ronald L. Brem, Steven Bakas, Spyridon Verma, Ragini Sci Rep Article In malignant primary brain tumors, cancer cells infiltrate into the peritumoral brain structures which results in inevitable recurrence. Quantitative assessment of infiltrative heterogeneity in the peritumoral region, the area where biopsy or resection can be hazardous, is important for clinical decision making. Here, we derive a novel set of Artificial intelligence (AI)-based markers capturing the heterogeneity of tumor infiltration, by characterizing free water movement restriction in the peritumoral region using Diffusion Tensor Imaging (DTI)-based free water volume fraction maps. We leverage the differences in the peritumoral region of metastasis and glioblastomas, the former consisting of vasogenic versus the latter containing infiltrative edema, to extract a voxel-wise deep learning-based peritumoral microenvironment index (PMI). Descriptive characteristics of locoregional hubs of uniformly high PMI values are then extracted as AI-based markers to capture distinct aspects of infiltrative heterogeneity. The proposed markers are utilized to stratify patients’ survival and IDH1 mutation status on a population of 275 adult-type diffuse gliomas (CNS WHO grade 4). Our results show significant differences in the proposed markers between patients with different overall survival and IDH1 mutation status (t test, Wilcoxon rank sum test, linear regression; p < 0.01). Clustering of patients using the proposed markers reveals distinct survival groups (logrank; p < 10(−5), Cox hazard ratio = 1.82; p < 0.005). Our findings provide a panel of markers as surrogates of infiltration that might capture novel insight about underlying biology of peritumoral microstructural heterogeneity, providing potential biomarkers of prognosis pertaining to survival and molecular stratification, with applicability in clinical decision making. Nature Publishing Group UK 2023-01-18 /pmc/articles/PMC9849348/ /pubmed/36653382 http://dx.doi.org/10.1038/s41598-022-26448-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Riahi Samani, Zahra
Parker, Drew
Akbari, Hamed
Wolf, Ronald L.
Brem, Steven
Bakas, Spyridon
Verma, Ragini
Artificial intelligence-based locoregional markers of brain peritumoral microenvironment
title Artificial intelligence-based locoregional markers of brain peritumoral microenvironment
title_full Artificial intelligence-based locoregional markers of brain peritumoral microenvironment
title_fullStr Artificial intelligence-based locoregional markers of brain peritumoral microenvironment
title_full_unstemmed Artificial intelligence-based locoregional markers of brain peritumoral microenvironment
title_short Artificial intelligence-based locoregional markers of brain peritumoral microenvironment
title_sort artificial intelligence-based locoregional markers of brain peritumoral microenvironment
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9849348/
https://www.ncbi.nlm.nih.gov/pubmed/36653382
http://dx.doi.org/10.1038/s41598-022-26448-9
work_keys_str_mv AT riahisamanizahra artificialintelligencebasedlocoregionalmarkersofbrainperitumoralmicroenvironment
AT parkerdrew artificialintelligencebasedlocoregionalmarkersofbrainperitumoralmicroenvironment
AT akbarihamed artificialintelligencebasedlocoregionalmarkersofbrainperitumoralmicroenvironment
AT wolfronaldl artificialintelligencebasedlocoregionalmarkersofbrainperitumoralmicroenvironment
AT bremsteven artificialintelligencebasedlocoregionalmarkersofbrainperitumoralmicroenvironment
AT bakasspyridon artificialintelligencebasedlocoregionalmarkersofbrainperitumoralmicroenvironment
AT vermaragini artificialintelligencebasedlocoregionalmarkersofbrainperitumoralmicroenvironment