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Automation of a Rule-based Workflow to Estimate Age from Brain MR Imaging of Infants and Children Up to 2 Years Old Using Stacked Deep Learning

Purpose: Myelination-related MR signal changes in white matter are helpful for assessing normal development in infants and children. A rule-based myelination evaluation workflow regarding signal changes on T1-weighted images (T1WIs) and T2-weighted images (T2WIs) has been widely used in radiology. T...

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Autores principales: Wada, Akihiko, Saito, Yuya, Fujita, Shohei, Irie, Ryusuke, Akashi, Toshiaki, Sano, Katsuhiro, Kato, Shinpei, Ikenouchi, Yutaka, Hagiwara, Akifumi, Sato, Kanako, Tomizawa, Nobuo, Hayakawa, Yayoi, Kikuta, Junko, Kamagata, Koji, Suzuki, Michimasa, Hori, Masaaki, Nakanishi, Atsushi, Aoki, Shigeki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Japanese Society for Magnetic Resonance in Medicine 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9849414/
https://www.ncbi.nlm.nih.gov/pubmed/34897147
http://dx.doi.org/10.2463/mrms.mp.2021-0068
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author Wada, Akihiko
Saito, Yuya
Fujita, Shohei
Irie, Ryusuke
Akashi, Toshiaki
Sano, Katsuhiro
Kato, Shinpei
Ikenouchi, Yutaka
Hagiwara, Akifumi
Sato, Kanako
Tomizawa, Nobuo
Hayakawa, Yayoi
Kikuta, Junko
Kamagata, Koji
Suzuki, Michimasa
Hori, Masaaki
Nakanishi, Atsushi
Aoki, Shigeki
author_facet Wada, Akihiko
Saito, Yuya
Fujita, Shohei
Irie, Ryusuke
Akashi, Toshiaki
Sano, Katsuhiro
Kato, Shinpei
Ikenouchi, Yutaka
Hagiwara, Akifumi
Sato, Kanako
Tomizawa, Nobuo
Hayakawa, Yayoi
Kikuta, Junko
Kamagata, Koji
Suzuki, Michimasa
Hori, Masaaki
Nakanishi, Atsushi
Aoki, Shigeki
author_sort Wada, Akihiko
collection PubMed
description Purpose: Myelination-related MR signal changes in white matter are helpful for assessing normal development in infants and children. A rule-based myelination evaluation workflow regarding signal changes on T1-weighted images (T1WIs) and T2-weighted images (T2WIs) has been widely used in radiology. This study aimed to simulate a rule-based workflow using a stacked deep learning model and evaluate age estimation accuracy. Methods: The age estimation system involved two stacked neural networks: a target network-to extract five myelination-related images from the whole brain, and an age estimation network from extracted T1- and T2WIs separately. A dataset was constructed from 119 children aged below 2 years with two MRI systems. A four-fold cross-validation method was adopted. The correlation coefficient (CC), mean absolute error (MAE), and root mean squared error (RMSE) of the corrected chronological age of full-term birth, as well as the mean difference and the upper and lower limits of 95% agreement, were measured. Generalization performance was assessed using datasets acquired from different MR images. Age estimation was performed in Sturge–Weber syndrome (SWS) cases. Results: There was a strong correlation between estimated age and corrected chronological age (MAE: 0.98 months; RMSE: 1.27 months; and CC: 0.99). The mean difference and standard deviation (SD) were −0.15 and 1.26, respectively, and the upper and lower limits of 95% agreement were 2.33 and −2.63 months. Regarding generalization performance, the performance values on the external dataset were MAE of 1.85 months, RMSE of 2.59 months, and CC of 0.93. Among 13 SWS cases, 7 exceeded the limits of 95% agreement, and a proportional bias of age estimation based on myelination acceleration was exhibited below 12 months of age (P = 0.03). Conclusion: Stacked deep learning models automated the rule-based workflow in radiology and achieved highly accurate age estimation in infants and children up to 2 years of age.
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spelling pubmed-98494142023-01-26 Automation of a Rule-based Workflow to Estimate Age from Brain MR Imaging of Infants and Children Up to 2 Years Old Using Stacked Deep Learning Wada, Akihiko Saito, Yuya Fujita, Shohei Irie, Ryusuke Akashi, Toshiaki Sano, Katsuhiro Kato, Shinpei Ikenouchi, Yutaka Hagiwara, Akifumi Sato, Kanako Tomizawa, Nobuo Hayakawa, Yayoi Kikuta, Junko Kamagata, Koji Suzuki, Michimasa Hori, Masaaki Nakanishi, Atsushi Aoki, Shigeki Magn Reson Med Sci Major Paper Purpose: Myelination-related MR signal changes in white matter are helpful for assessing normal development in infants and children. A rule-based myelination evaluation workflow regarding signal changes on T1-weighted images (T1WIs) and T2-weighted images (T2WIs) has been widely used in radiology. This study aimed to simulate a rule-based workflow using a stacked deep learning model and evaluate age estimation accuracy. Methods: The age estimation system involved two stacked neural networks: a target network-to extract five myelination-related images from the whole brain, and an age estimation network from extracted T1- and T2WIs separately. A dataset was constructed from 119 children aged below 2 years with two MRI systems. A four-fold cross-validation method was adopted. The correlation coefficient (CC), mean absolute error (MAE), and root mean squared error (RMSE) of the corrected chronological age of full-term birth, as well as the mean difference and the upper and lower limits of 95% agreement, were measured. Generalization performance was assessed using datasets acquired from different MR images. Age estimation was performed in Sturge–Weber syndrome (SWS) cases. Results: There was a strong correlation between estimated age and corrected chronological age (MAE: 0.98 months; RMSE: 1.27 months; and CC: 0.99). The mean difference and standard deviation (SD) were −0.15 and 1.26, respectively, and the upper and lower limits of 95% agreement were 2.33 and −2.63 months. Regarding generalization performance, the performance values on the external dataset were MAE of 1.85 months, RMSE of 2.59 months, and CC of 0.93. Among 13 SWS cases, 7 exceeded the limits of 95% agreement, and a proportional bias of age estimation based on myelination acceleration was exhibited below 12 months of age (P = 0.03). Conclusion: Stacked deep learning models automated the rule-based workflow in radiology and achieved highly accurate age estimation in infants and children up to 2 years of age. Japanese Society for Magnetic Resonance in Medicine 2021-12-10 /pmc/articles/PMC9849414/ /pubmed/34897147 http://dx.doi.org/10.2463/mrms.mp.2021-0068 Text en ©2021 Japanese Society for Magnetic Resonance in Medicine https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/)
spellingShingle Major Paper
Wada, Akihiko
Saito, Yuya
Fujita, Shohei
Irie, Ryusuke
Akashi, Toshiaki
Sano, Katsuhiro
Kato, Shinpei
Ikenouchi, Yutaka
Hagiwara, Akifumi
Sato, Kanako
Tomizawa, Nobuo
Hayakawa, Yayoi
Kikuta, Junko
Kamagata, Koji
Suzuki, Michimasa
Hori, Masaaki
Nakanishi, Atsushi
Aoki, Shigeki
Automation of a Rule-based Workflow to Estimate Age from Brain MR Imaging of Infants and Children Up to 2 Years Old Using Stacked Deep Learning
title Automation of a Rule-based Workflow to Estimate Age from Brain MR Imaging of Infants and Children Up to 2 Years Old Using Stacked Deep Learning
title_full Automation of a Rule-based Workflow to Estimate Age from Brain MR Imaging of Infants and Children Up to 2 Years Old Using Stacked Deep Learning
title_fullStr Automation of a Rule-based Workflow to Estimate Age from Brain MR Imaging of Infants and Children Up to 2 Years Old Using Stacked Deep Learning
title_full_unstemmed Automation of a Rule-based Workflow to Estimate Age from Brain MR Imaging of Infants and Children Up to 2 Years Old Using Stacked Deep Learning
title_short Automation of a Rule-based Workflow to Estimate Age from Brain MR Imaging of Infants and Children Up to 2 Years Old Using Stacked Deep Learning
title_sort automation of a rule-based workflow to estimate age from brain mr imaging of infants and children up to 2 years old using stacked deep learning
topic Major Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9849414/
https://www.ncbi.nlm.nih.gov/pubmed/34897147
http://dx.doi.org/10.2463/mrms.mp.2021-0068
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