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Towards evolutionary predictions: Current promises and challenges

Evolution has traditionally been a historical and descriptive science, and predicting future evolutionary processes has long been considered impossible. However, evolutionary predictions are increasingly being developed and used in medicine, agriculture, biotechnology and conservation biology. Evolu...

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Autores principales: Wortel, Meike T., Agashe, Deepa, Bailey, Susan F., Bank, Claudia, Bisschop, Karen, Blankers, Thomas, Cairns, Johannes, Colizzi, Enrico Sandro, Cusseddu, Davide, Desai, Michael M., van Dijk, Bram, Egas, Martijn, Ellers, Jacintha, Groot, Astrid T., Heckel, David G., Johnson, Marcelle L., Kraaijeveld, Ken, Krug, Joachim, Laan, Liedewij, Lässig, Michael, Lind, Peter A., Meijer, Jeroen, Noble, Luke M., Okasha, Samir, Rainey, Paul B., Rozen, Daniel E., Shitut, Shraddha, Tans, Sander J., Tenaillon, Olivier, Teotónio, Henrique, de Visser, J. Arjan G. M., Visser, Marcel E., Vroomans, Renske M. A., Werner, Gijsbert D. A., Wertheim, Bregje, Pennings, Pleuni S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9850016/
https://www.ncbi.nlm.nih.gov/pubmed/36699126
http://dx.doi.org/10.1111/eva.13513
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author Wortel, Meike T.
Agashe, Deepa
Bailey, Susan F.
Bank, Claudia
Bisschop, Karen
Blankers, Thomas
Cairns, Johannes
Colizzi, Enrico Sandro
Cusseddu, Davide
Desai, Michael M.
van Dijk, Bram
Egas, Martijn
Ellers, Jacintha
Groot, Astrid T.
Heckel, David G.
Johnson, Marcelle L.
Kraaijeveld, Ken
Krug, Joachim
Laan, Liedewij
Lässig, Michael
Lind, Peter A.
Meijer, Jeroen
Noble, Luke M.
Okasha, Samir
Rainey, Paul B.
Rozen, Daniel E.
Shitut, Shraddha
Tans, Sander J.
Tenaillon, Olivier
Teotónio, Henrique
de Visser, J. Arjan G. M.
Visser, Marcel E.
Vroomans, Renske M. A.
Werner, Gijsbert D. A.
Wertheim, Bregje
Pennings, Pleuni S.
author_facet Wortel, Meike T.
Agashe, Deepa
Bailey, Susan F.
Bank, Claudia
Bisschop, Karen
Blankers, Thomas
Cairns, Johannes
Colizzi, Enrico Sandro
Cusseddu, Davide
Desai, Michael M.
van Dijk, Bram
Egas, Martijn
Ellers, Jacintha
Groot, Astrid T.
Heckel, David G.
Johnson, Marcelle L.
Kraaijeveld, Ken
Krug, Joachim
Laan, Liedewij
Lässig, Michael
Lind, Peter A.
Meijer, Jeroen
Noble, Luke M.
Okasha, Samir
Rainey, Paul B.
Rozen, Daniel E.
Shitut, Shraddha
Tans, Sander J.
Tenaillon, Olivier
Teotónio, Henrique
de Visser, J. Arjan G. M.
Visser, Marcel E.
Vroomans, Renske M. A.
Werner, Gijsbert D. A.
Wertheim, Bregje
Pennings, Pleuni S.
author_sort Wortel, Meike T.
collection PubMed
description Evolution has traditionally been a historical and descriptive science, and predicting future evolutionary processes has long been considered impossible. However, evolutionary predictions are increasingly being developed and used in medicine, agriculture, biotechnology and conservation biology. Evolutionary predictions may be used for different purposes, such as to prepare for the future, to try and change the course of evolution or to determine how well we understand evolutionary processes. Similarly, the exact aspect of the evolved population that we want to predict may also differ. For example, we could try to predict which genotype will dominate, the fitness of the population or the extinction probability of a population. In addition, there are many uses of evolutionary predictions that may not always be recognized as such. The main goal of this review is to increase awareness of methods and data in different research fields by showing the breadth of situations in which evolutionary predictions are made. We describe how diverse evolutionary predictions share a common structure described by the predictive scope, time scale and precision. Then, by using examples ranging from SARS‐CoV2 and influenza to CRISPR‐based gene drives and sustainable product formation in biotechnology, we discuss the methods for predicting evolution, the factors that affect predictability and how predictions can be used to prevent evolution in undesirable directions or to promote beneficial evolution (i.e. evolutionary control). We hope that this review will stimulate collaboration between fields by establishing a common language for evolutionary predictions.
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spelling pubmed-98500162023-01-24 Towards evolutionary predictions: Current promises and challenges Wortel, Meike T. Agashe, Deepa Bailey, Susan F. Bank, Claudia Bisschop, Karen Blankers, Thomas Cairns, Johannes Colizzi, Enrico Sandro Cusseddu, Davide Desai, Michael M. van Dijk, Bram Egas, Martijn Ellers, Jacintha Groot, Astrid T. Heckel, David G. Johnson, Marcelle L. Kraaijeveld, Ken Krug, Joachim Laan, Liedewij Lässig, Michael Lind, Peter A. Meijer, Jeroen Noble, Luke M. Okasha, Samir Rainey, Paul B. Rozen, Daniel E. Shitut, Shraddha Tans, Sander J. Tenaillon, Olivier Teotónio, Henrique de Visser, J. Arjan G. M. Visser, Marcel E. Vroomans, Renske M. A. Werner, Gijsbert D. A. Wertheim, Bregje Pennings, Pleuni S. Evol Appl Review Evolution has traditionally been a historical and descriptive science, and predicting future evolutionary processes has long been considered impossible. However, evolutionary predictions are increasingly being developed and used in medicine, agriculture, biotechnology and conservation biology. Evolutionary predictions may be used for different purposes, such as to prepare for the future, to try and change the course of evolution or to determine how well we understand evolutionary processes. Similarly, the exact aspect of the evolved population that we want to predict may also differ. For example, we could try to predict which genotype will dominate, the fitness of the population or the extinction probability of a population. In addition, there are many uses of evolutionary predictions that may not always be recognized as such. The main goal of this review is to increase awareness of methods and data in different research fields by showing the breadth of situations in which evolutionary predictions are made. We describe how diverse evolutionary predictions share a common structure described by the predictive scope, time scale and precision. Then, by using examples ranging from SARS‐CoV2 and influenza to CRISPR‐based gene drives and sustainable product formation in biotechnology, we discuss the methods for predicting evolution, the factors that affect predictability and how predictions can be used to prevent evolution in undesirable directions or to promote beneficial evolution (i.e. evolutionary control). We hope that this review will stimulate collaboration between fields by establishing a common language for evolutionary predictions. John Wiley and Sons Inc. 2022-12-09 /pmc/articles/PMC9850016/ /pubmed/36699126 http://dx.doi.org/10.1111/eva.13513 Text en © 2022 The Authors. Evolutionary Applications published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review
Wortel, Meike T.
Agashe, Deepa
Bailey, Susan F.
Bank, Claudia
Bisschop, Karen
Blankers, Thomas
Cairns, Johannes
Colizzi, Enrico Sandro
Cusseddu, Davide
Desai, Michael M.
van Dijk, Bram
Egas, Martijn
Ellers, Jacintha
Groot, Astrid T.
Heckel, David G.
Johnson, Marcelle L.
Kraaijeveld, Ken
Krug, Joachim
Laan, Liedewij
Lässig, Michael
Lind, Peter A.
Meijer, Jeroen
Noble, Luke M.
Okasha, Samir
Rainey, Paul B.
Rozen, Daniel E.
Shitut, Shraddha
Tans, Sander J.
Tenaillon, Olivier
Teotónio, Henrique
de Visser, J. Arjan G. M.
Visser, Marcel E.
Vroomans, Renske M. A.
Werner, Gijsbert D. A.
Wertheim, Bregje
Pennings, Pleuni S.
Towards evolutionary predictions: Current promises and challenges
title Towards evolutionary predictions: Current promises and challenges
title_full Towards evolutionary predictions: Current promises and challenges
title_fullStr Towards evolutionary predictions: Current promises and challenges
title_full_unstemmed Towards evolutionary predictions: Current promises and challenges
title_short Towards evolutionary predictions: Current promises and challenges
title_sort towards evolutionary predictions: current promises and challenges
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9850016/
https://www.ncbi.nlm.nih.gov/pubmed/36699126
http://dx.doi.org/10.1111/eva.13513
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