Cargando…

Local characteristics of molecular epidemiolgy of Acinetobacter baumannii in Jilin province (northeast China)

A. Baumannii is an opportunistic nosocomial pathogen which has severe antibiotic resistance. However, the epidemiology is less clearly understood in Jilin province and China. Thus, 89 A. baumannii isolates from a single hospital in Jilin province between 2013–2017 were performed by MLST. In order to...

Descripción completa

Detalles Bibliográficos
Autores principales: You, Qingsong, Du, Xue, Hu, Nannan, Zhang, Yusi, Zhang, Na, Wang, Fusheng, Li, Jinghua, sun, Yanbo, Wang, Fang, Shi, Hongyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9850558/
https://www.ncbi.nlm.nih.gov/pubmed/36658486
http://dx.doi.org/10.1186/s12866-023-02761-9
_version_ 1784872211752943616
author You, Qingsong
Du, Xue
Hu, Nannan
Zhang, Yusi
Zhang, Na
Wang, Fusheng
Li, Jinghua
sun, Yanbo
Wang, Fang
Shi, Hongyan
author_facet You, Qingsong
Du, Xue
Hu, Nannan
Zhang, Yusi
Zhang, Na
Wang, Fusheng
Li, Jinghua
sun, Yanbo
Wang, Fang
Shi, Hongyan
author_sort You, Qingsong
collection PubMed
description A. Baumannii is an opportunistic nosocomial pathogen which has severe antibiotic resistance. However, the epidemiology is less clearly understood in Jilin province and China. Thus, 89 A. baumannii isolates from a single hospital in Jilin province between 2013–2017 were performed by MLST. In order to better understanding of the epidemiology of Jilin isolates, Chinese strains originated from other domestic regions and worldwide isolates in MLST database were analyzed by silico phylogenetic tools together. A total of 22 STs in Jilin were identified, and 10 STs were found to be novel. The top three predominant sequence types are ST195 (n = 34, 38.2%), ST208 (n = 14, 15.7%) and ST540 (n = 13, 14.6%). ST369 is predicted to be group founder and ST195, ST540 are subgroup founders of the majority STs in Jilin Province. Some newly discovered singletons showed close relationship with strains from other countries, which suggest that nation-cross transmission is one of important origin of Jilin strains. The majority of Jilin STs showed clonality and close relationship with the majorities from other regions of China. But occupation of individual STs in Jilin were different from that of other domestic regions. The aggregation trend and genetic relationship proved that predominant Jilin STs continue to mutate during transmission. Drug resistance facilitated transmission of Jilin A.baumannii isolates because more than 94% of isolates are resistant to at least one carbapenem and the STs with strong resistance to carbapenems usually has more isolates. In conclusion, high diversity and different occupation of STs, and occupation of novel STs proved that epidemiology of A. baumannii in Jilin has special regional characteristics, and drug resistance facilitated transmission of domestic strains and foreign strains.
format Online
Article
Text
id pubmed-9850558
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-98505582023-01-20 Local characteristics of molecular epidemiolgy of Acinetobacter baumannii in Jilin province (northeast China) You, Qingsong Du, Xue Hu, Nannan Zhang, Yusi Zhang, Na Wang, Fusheng Li, Jinghua sun, Yanbo Wang, Fang Shi, Hongyan BMC Microbiol Research A. Baumannii is an opportunistic nosocomial pathogen which has severe antibiotic resistance. However, the epidemiology is less clearly understood in Jilin province and China. Thus, 89 A. baumannii isolates from a single hospital in Jilin province between 2013–2017 were performed by MLST. In order to better understanding of the epidemiology of Jilin isolates, Chinese strains originated from other domestic regions and worldwide isolates in MLST database were analyzed by silico phylogenetic tools together. A total of 22 STs in Jilin were identified, and 10 STs were found to be novel. The top three predominant sequence types are ST195 (n = 34, 38.2%), ST208 (n = 14, 15.7%) and ST540 (n = 13, 14.6%). ST369 is predicted to be group founder and ST195, ST540 are subgroup founders of the majority STs in Jilin Province. Some newly discovered singletons showed close relationship with strains from other countries, which suggest that nation-cross transmission is one of important origin of Jilin strains. The majority of Jilin STs showed clonality and close relationship with the majorities from other regions of China. But occupation of individual STs in Jilin were different from that of other domestic regions. The aggregation trend and genetic relationship proved that predominant Jilin STs continue to mutate during transmission. Drug resistance facilitated transmission of Jilin A.baumannii isolates because more than 94% of isolates are resistant to at least one carbapenem and the STs with strong resistance to carbapenems usually has more isolates. In conclusion, high diversity and different occupation of STs, and occupation of novel STs proved that epidemiology of A. baumannii in Jilin has special regional characteristics, and drug resistance facilitated transmission of domestic strains and foreign strains. BioMed Central 2023-01-19 /pmc/articles/PMC9850558/ /pubmed/36658486 http://dx.doi.org/10.1186/s12866-023-02761-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
You, Qingsong
Du, Xue
Hu, Nannan
Zhang, Yusi
Zhang, Na
Wang, Fusheng
Li, Jinghua
sun, Yanbo
Wang, Fang
Shi, Hongyan
Local characteristics of molecular epidemiolgy of Acinetobacter baumannii in Jilin province (northeast China)
title Local characteristics of molecular epidemiolgy of Acinetobacter baumannii in Jilin province (northeast China)
title_full Local characteristics of molecular epidemiolgy of Acinetobacter baumannii in Jilin province (northeast China)
title_fullStr Local characteristics of molecular epidemiolgy of Acinetobacter baumannii in Jilin province (northeast China)
title_full_unstemmed Local characteristics of molecular epidemiolgy of Acinetobacter baumannii in Jilin province (northeast China)
title_short Local characteristics of molecular epidemiolgy of Acinetobacter baumannii in Jilin province (northeast China)
title_sort local characteristics of molecular epidemiolgy of acinetobacter baumannii in jilin province (northeast china)
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9850558/
https://www.ncbi.nlm.nih.gov/pubmed/36658486
http://dx.doi.org/10.1186/s12866-023-02761-9
work_keys_str_mv AT youqingsong localcharacteristicsofmolecularepidemiolgyofacinetobacterbaumanniiinjilinprovincenortheastchina
AT duxue localcharacteristicsofmolecularepidemiolgyofacinetobacterbaumanniiinjilinprovincenortheastchina
AT hunannan localcharacteristicsofmolecularepidemiolgyofacinetobacterbaumanniiinjilinprovincenortheastchina
AT zhangyusi localcharacteristicsofmolecularepidemiolgyofacinetobacterbaumanniiinjilinprovincenortheastchina
AT zhangna localcharacteristicsofmolecularepidemiolgyofacinetobacterbaumanniiinjilinprovincenortheastchina
AT wangfusheng localcharacteristicsofmolecularepidemiolgyofacinetobacterbaumanniiinjilinprovincenortheastchina
AT lijinghua localcharacteristicsofmolecularepidemiolgyofacinetobacterbaumanniiinjilinprovincenortheastchina
AT sunyanbo localcharacteristicsofmolecularepidemiolgyofacinetobacterbaumanniiinjilinprovincenortheastchina
AT wangfang localcharacteristicsofmolecularepidemiolgyofacinetobacterbaumanniiinjilinprovincenortheastchina
AT shihongyan localcharacteristicsofmolecularepidemiolgyofacinetobacterbaumanniiinjilinprovincenortheastchina