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Structural Elucidation and Engineering of a Bacterial Carbohydrate Oxidase
[Image: see text] Flavin-dependent carbohydrate oxidases are valuable tools in biotechnological applications due to their high selectivity in the oxidation of carbohydrates. In this study, we report the biochemical and structural characterization of a recently discovered carbohydrate oxidase from th...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9850908/ https://www.ncbi.nlm.nih.gov/pubmed/35881507 http://dx.doi.org/10.1021/acs.biochem.2c00307 |
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author | Boverio, Alessandro Widodo, Wahyu S. Santema, Lars L. Rozeboom, Henriëtte J. Xiang, Ruite Guallar, Víctor Mattevi, Andrea Fraaije, Marco W. |
author_facet | Boverio, Alessandro Widodo, Wahyu S. Santema, Lars L. Rozeboom, Henriëtte J. Xiang, Ruite Guallar, Víctor Mattevi, Andrea Fraaije, Marco W. |
author_sort | Boverio, Alessandro |
collection | PubMed |
description | [Image: see text] Flavin-dependent carbohydrate oxidases are valuable tools in biotechnological applications due to their high selectivity in the oxidation of carbohydrates. In this study, we report the biochemical and structural characterization of a recently discovered carbohydrate oxidase from the bacterium Ralstonia solanacearum, which is a member of the vanillyl alcohol oxidase flavoprotein family. Due to its exceptionally high activity toward N-acetyl-d-galactosamine and N-acetyl-d-glucosamine, the enzyme was named N-acetyl-glucosamine oxidase (NagOx). In contrast to most known (fungal) carbohydrate oxidases, NagOx could be overexpressed in a bacterial host, which facilitated detailed biochemical and enzyme engineering studies. Steady state kinetic analyses revealed that non-acetylated hexoses were also accepted as substrates albeit with lower efficiency. Upon determination of the crystal structure, structural insights into NagOx were obtained. A large cavity containing a bicovalently bound FAD, tethered via histidyl and cysteinyl linkages, was observed. Substrate docking highlighted how a single residue (Leu251) plays a key role in the accommodation of N-acetylated sugars in the active site. Upon replacement of Leu251 (L251R mutant), an enzyme variant was generated with a drastically modified substrate acceptance profile, tuned toward non-N-acetylated monosaccharides and disaccharides. Furthermore, the activity toward bulkier substrates such as the trisaccharide maltotriose was introduced by this mutation. Due to its advantage of being overexpressed in a bacterial host, NagOx can be considered a promising alternative engineerable biocatalyst for selective oxidation of monosaccharides and oligosaccharides. |
format | Online Article Text |
id | pubmed-9850908 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-98509082023-01-20 Structural Elucidation and Engineering of a Bacterial Carbohydrate Oxidase Boverio, Alessandro Widodo, Wahyu S. Santema, Lars L. Rozeboom, Henriëtte J. Xiang, Ruite Guallar, Víctor Mattevi, Andrea Fraaije, Marco W. Biochemistry [Image: see text] Flavin-dependent carbohydrate oxidases are valuable tools in biotechnological applications due to their high selectivity in the oxidation of carbohydrates. In this study, we report the biochemical and structural characterization of a recently discovered carbohydrate oxidase from the bacterium Ralstonia solanacearum, which is a member of the vanillyl alcohol oxidase flavoprotein family. Due to its exceptionally high activity toward N-acetyl-d-galactosamine and N-acetyl-d-glucosamine, the enzyme was named N-acetyl-glucosamine oxidase (NagOx). In contrast to most known (fungal) carbohydrate oxidases, NagOx could be overexpressed in a bacterial host, which facilitated detailed biochemical and enzyme engineering studies. Steady state kinetic analyses revealed that non-acetylated hexoses were also accepted as substrates albeit with lower efficiency. Upon determination of the crystal structure, structural insights into NagOx were obtained. A large cavity containing a bicovalently bound FAD, tethered via histidyl and cysteinyl linkages, was observed. Substrate docking highlighted how a single residue (Leu251) plays a key role in the accommodation of N-acetylated sugars in the active site. Upon replacement of Leu251 (L251R mutant), an enzyme variant was generated with a drastically modified substrate acceptance profile, tuned toward non-N-acetylated monosaccharides and disaccharides. Furthermore, the activity toward bulkier substrates such as the trisaccharide maltotriose was introduced by this mutation. Due to its advantage of being overexpressed in a bacterial host, NagOx can be considered a promising alternative engineerable biocatalyst for selective oxidation of monosaccharides and oligosaccharides. American Chemical Society 2022-07-26 /pmc/articles/PMC9850908/ /pubmed/35881507 http://dx.doi.org/10.1021/acs.biochem.2c00307 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Boverio, Alessandro Widodo, Wahyu S. Santema, Lars L. Rozeboom, Henriëtte J. Xiang, Ruite Guallar, Víctor Mattevi, Andrea Fraaije, Marco W. Structural Elucidation and Engineering of a Bacterial Carbohydrate Oxidase |
title | Structural Elucidation
and Engineering of a Bacterial
Carbohydrate Oxidase |
title_full | Structural Elucidation
and Engineering of a Bacterial
Carbohydrate Oxidase |
title_fullStr | Structural Elucidation
and Engineering of a Bacterial
Carbohydrate Oxidase |
title_full_unstemmed | Structural Elucidation
and Engineering of a Bacterial
Carbohydrate Oxidase |
title_short | Structural Elucidation
and Engineering of a Bacterial
Carbohydrate Oxidase |
title_sort | structural elucidation
and engineering of a bacterial
carbohydrate oxidase |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9850908/ https://www.ncbi.nlm.nih.gov/pubmed/35881507 http://dx.doi.org/10.1021/acs.biochem.2c00307 |
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