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Structural Elucidation and Engineering of a Bacterial Carbohydrate Oxidase

[Image: see text] Flavin-dependent carbohydrate oxidases are valuable tools in biotechnological applications due to their high selectivity in the oxidation of carbohydrates. In this study, we report the biochemical and structural characterization of a recently discovered carbohydrate oxidase from th...

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Autores principales: Boverio, Alessandro, Widodo, Wahyu S., Santema, Lars L., Rozeboom, Henriëtte J., Xiang, Ruite, Guallar, Víctor, Mattevi, Andrea, Fraaije, Marco W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9850908/
https://www.ncbi.nlm.nih.gov/pubmed/35881507
http://dx.doi.org/10.1021/acs.biochem.2c00307
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author Boverio, Alessandro
Widodo, Wahyu S.
Santema, Lars L.
Rozeboom, Henriëtte J.
Xiang, Ruite
Guallar, Víctor
Mattevi, Andrea
Fraaije, Marco W.
author_facet Boverio, Alessandro
Widodo, Wahyu S.
Santema, Lars L.
Rozeboom, Henriëtte J.
Xiang, Ruite
Guallar, Víctor
Mattevi, Andrea
Fraaije, Marco W.
author_sort Boverio, Alessandro
collection PubMed
description [Image: see text] Flavin-dependent carbohydrate oxidases are valuable tools in biotechnological applications due to their high selectivity in the oxidation of carbohydrates. In this study, we report the biochemical and structural characterization of a recently discovered carbohydrate oxidase from the bacterium Ralstonia solanacearum, which is a member of the vanillyl alcohol oxidase flavoprotein family. Due to its exceptionally high activity toward N-acetyl-d-galactosamine and N-acetyl-d-glucosamine, the enzyme was named N-acetyl-glucosamine oxidase (NagOx). In contrast to most known (fungal) carbohydrate oxidases, NagOx could be overexpressed in a bacterial host, which facilitated detailed biochemical and enzyme engineering studies. Steady state kinetic analyses revealed that non-acetylated hexoses were also accepted as substrates albeit with lower efficiency. Upon determination of the crystal structure, structural insights into NagOx were obtained. A large cavity containing a bicovalently bound FAD, tethered via histidyl and cysteinyl linkages, was observed. Substrate docking highlighted how a single residue (Leu251) plays a key role in the accommodation of N-acetylated sugars in the active site. Upon replacement of Leu251 (L251R mutant), an enzyme variant was generated with a drastically modified substrate acceptance profile, tuned toward non-N-acetylated monosaccharides and disaccharides. Furthermore, the activity toward bulkier substrates such as the trisaccharide maltotriose was introduced by this mutation. Due to its advantage of being overexpressed in a bacterial host, NagOx can be considered a promising alternative engineerable biocatalyst for selective oxidation of monosaccharides and oligosaccharides.
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spelling pubmed-98509082023-01-20 Structural Elucidation and Engineering of a Bacterial Carbohydrate Oxidase Boverio, Alessandro Widodo, Wahyu S. Santema, Lars L. Rozeboom, Henriëtte J. Xiang, Ruite Guallar, Víctor Mattevi, Andrea Fraaije, Marco W. Biochemistry [Image: see text] Flavin-dependent carbohydrate oxidases are valuable tools in biotechnological applications due to their high selectivity in the oxidation of carbohydrates. In this study, we report the biochemical and structural characterization of a recently discovered carbohydrate oxidase from the bacterium Ralstonia solanacearum, which is a member of the vanillyl alcohol oxidase flavoprotein family. Due to its exceptionally high activity toward N-acetyl-d-galactosamine and N-acetyl-d-glucosamine, the enzyme was named N-acetyl-glucosamine oxidase (NagOx). In contrast to most known (fungal) carbohydrate oxidases, NagOx could be overexpressed in a bacterial host, which facilitated detailed biochemical and enzyme engineering studies. Steady state kinetic analyses revealed that non-acetylated hexoses were also accepted as substrates albeit with lower efficiency. Upon determination of the crystal structure, structural insights into NagOx were obtained. A large cavity containing a bicovalently bound FAD, tethered via histidyl and cysteinyl linkages, was observed. Substrate docking highlighted how a single residue (Leu251) plays a key role in the accommodation of N-acetylated sugars in the active site. Upon replacement of Leu251 (L251R mutant), an enzyme variant was generated with a drastically modified substrate acceptance profile, tuned toward non-N-acetylated monosaccharides and disaccharides. Furthermore, the activity toward bulkier substrates such as the trisaccharide maltotriose was introduced by this mutation. Due to its advantage of being overexpressed in a bacterial host, NagOx can be considered a promising alternative engineerable biocatalyst for selective oxidation of monosaccharides and oligosaccharides. American Chemical Society 2022-07-26 /pmc/articles/PMC9850908/ /pubmed/35881507 http://dx.doi.org/10.1021/acs.biochem.2c00307 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Boverio, Alessandro
Widodo, Wahyu S.
Santema, Lars L.
Rozeboom, Henriëtte J.
Xiang, Ruite
Guallar, Víctor
Mattevi, Andrea
Fraaije, Marco W.
Structural Elucidation and Engineering of a Bacterial Carbohydrate Oxidase
title Structural Elucidation and Engineering of a Bacterial Carbohydrate Oxidase
title_full Structural Elucidation and Engineering of a Bacterial Carbohydrate Oxidase
title_fullStr Structural Elucidation and Engineering of a Bacterial Carbohydrate Oxidase
title_full_unstemmed Structural Elucidation and Engineering of a Bacterial Carbohydrate Oxidase
title_short Structural Elucidation and Engineering of a Bacterial Carbohydrate Oxidase
title_sort structural elucidation and engineering of a bacterial carbohydrate oxidase
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9850908/
https://www.ncbi.nlm.nih.gov/pubmed/35881507
http://dx.doi.org/10.1021/acs.biochem.2c00307
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