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Chain-Engineering-Based De Novo Drug Design against MPXVgp169 Virulent Protein of Monkeypox Virus: A Molecular Modification Approach

The unexpected appearance of the monkeypox virus and the extensive geographic dispersal of cases have prompted researchers to concentrate on potential therapeutic approaches. In addition to its vaccine build techniques, there should be some multiple integrated antiviral active compounds because of t...

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Autores principales: Naveed, Muhammad, Shabbir, Muhammad Aqib, Ain, Noor-ul, Javed, Khushbakht, Mahmood, Sarmad, Aziz, Tariq, Khan, Ayaz Ali, Nabi, Ghulam, Shahzad, Muhammad, Alharbi, Mousa Essa, Alharbi, Metab, Alshammari, Abdulrahman
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9854718/
https://www.ncbi.nlm.nih.gov/pubmed/36671583
http://dx.doi.org/10.3390/bioengineering10010011
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author Naveed, Muhammad
Shabbir, Muhammad Aqib
Ain, Noor-ul
Javed, Khushbakht
Mahmood, Sarmad
Aziz, Tariq
Khan, Ayaz Ali
Nabi, Ghulam
Shahzad, Muhammad
Alharbi, Mousa Essa
Alharbi, Metab
Alshammari, Abdulrahman
author_facet Naveed, Muhammad
Shabbir, Muhammad Aqib
Ain, Noor-ul
Javed, Khushbakht
Mahmood, Sarmad
Aziz, Tariq
Khan, Ayaz Ali
Nabi, Ghulam
Shahzad, Muhammad
Alharbi, Mousa Essa
Alharbi, Metab
Alshammari, Abdulrahman
author_sort Naveed, Muhammad
collection PubMed
description The unexpected appearance of the monkeypox virus and the extensive geographic dispersal of cases have prompted researchers to concentrate on potential therapeutic approaches. In addition to its vaccine build techniques, there should be some multiple integrated antiviral active compounds because of the MPV (monkeypox virus) outbreak in 2022. This study offers a computational engineering-based de novo drug discovery mediated by random antiviral active compounds that were screened against the virulent protein MPXVgp169, as one of the key players directing the pathogenesis of the virus. The screening of these candidates was supported by the use of 72 antiviral active compounds. The top candidate with the lowest binding affinity was selected for the engineering of chains or atoms. Literature assisted to identify toxic chains or atoms that were impeding the stability and effectiveness of antiviral compounds to modify them for enhanced efficacy. With a binding affinity of −9.4 Kcal/mol after chain, the lipophilicity of 0.41, the water solubility of 2.51 as soluble, and synthetic accessibility of 6.6, chain-engineered dolutegravir was one of the best active compounds, as proved by the computational engineering analysis. This study will revolutionize the era of drug engineering as a potential therapeutic strategy for monkeypox infection.
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spelling pubmed-98547182023-01-21 Chain-Engineering-Based De Novo Drug Design against MPXVgp169 Virulent Protein of Monkeypox Virus: A Molecular Modification Approach Naveed, Muhammad Shabbir, Muhammad Aqib Ain, Noor-ul Javed, Khushbakht Mahmood, Sarmad Aziz, Tariq Khan, Ayaz Ali Nabi, Ghulam Shahzad, Muhammad Alharbi, Mousa Essa Alharbi, Metab Alshammari, Abdulrahman Bioengineering (Basel) Article The unexpected appearance of the monkeypox virus and the extensive geographic dispersal of cases have prompted researchers to concentrate on potential therapeutic approaches. In addition to its vaccine build techniques, there should be some multiple integrated antiviral active compounds because of the MPV (monkeypox virus) outbreak in 2022. This study offers a computational engineering-based de novo drug discovery mediated by random antiviral active compounds that were screened against the virulent protein MPXVgp169, as one of the key players directing the pathogenesis of the virus. The screening of these candidates was supported by the use of 72 antiviral active compounds. The top candidate with the lowest binding affinity was selected for the engineering of chains or atoms. Literature assisted to identify toxic chains or atoms that were impeding the stability and effectiveness of antiviral compounds to modify them for enhanced efficacy. With a binding affinity of −9.4 Kcal/mol after chain, the lipophilicity of 0.41, the water solubility of 2.51 as soluble, and synthetic accessibility of 6.6, chain-engineered dolutegravir was one of the best active compounds, as proved by the computational engineering analysis. This study will revolutionize the era of drug engineering as a potential therapeutic strategy for monkeypox infection. MDPI 2022-12-21 /pmc/articles/PMC9854718/ /pubmed/36671583 http://dx.doi.org/10.3390/bioengineering10010011 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Naveed, Muhammad
Shabbir, Muhammad Aqib
Ain, Noor-ul
Javed, Khushbakht
Mahmood, Sarmad
Aziz, Tariq
Khan, Ayaz Ali
Nabi, Ghulam
Shahzad, Muhammad
Alharbi, Mousa Essa
Alharbi, Metab
Alshammari, Abdulrahman
Chain-Engineering-Based De Novo Drug Design against MPXVgp169 Virulent Protein of Monkeypox Virus: A Molecular Modification Approach
title Chain-Engineering-Based De Novo Drug Design against MPXVgp169 Virulent Protein of Monkeypox Virus: A Molecular Modification Approach
title_full Chain-Engineering-Based De Novo Drug Design against MPXVgp169 Virulent Protein of Monkeypox Virus: A Molecular Modification Approach
title_fullStr Chain-Engineering-Based De Novo Drug Design against MPXVgp169 Virulent Protein of Monkeypox Virus: A Molecular Modification Approach
title_full_unstemmed Chain-Engineering-Based De Novo Drug Design against MPXVgp169 Virulent Protein of Monkeypox Virus: A Molecular Modification Approach
title_short Chain-Engineering-Based De Novo Drug Design against MPXVgp169 Virulent Protein of Monkeypox Virus: A Molecular Modification Approach
title_sort chain-engineering-based de novo drug design against mpxvgp169 virulent protein of monkeypox virus: a molecular modification approach
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9854718/
https://www.ncbi.nlm.nih.gov/pubmed/36671583
http://dx.doi.org/10.3390/bioengineering10010011
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