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Axial Attention Convolutional Neural Network for Brain Tumor Segmentation with Multi-Modality MRI Scans

Accurately identifying tumors from MRI scans is of the utmost importance for clinical diagnostics and when making plans regarding brain tumor treatment. However, manual segmentation is a challenging and time-consuming process in practice and exhibits a high degree of variability between doctors. The...

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Detalles Bibliográficos
Autores principales: Tian, Weiwei, Li, Dengwang, Lv, Mengyu, Huang, Pu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9856007/
https://www.ncbi.nlm.nih.gov/pubmed/36671994
http://dx.doi.org/10.3390/brainsci13010012
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author Tian, Weiwei
Li, Dengwang
Lv, Mengyu
Huang, Pu
author_facet Tian, Weiwei
Li, Dengwang
Lv, Mengyu
Huang, Pu
author_sort Tian, Weiwei
collection PubMed
description Accurately identifying tumors from MRI scans is of the utmost importance for clinical diagnostics and when making plans regarding brain tumor treatment. However, manual segmentation is a challenging and time-consuming process in practice and exhibits a high degree of variability between doctors. Therefore, an axial attention brain tumor segmentation network was established in this paper, automatically segmenting tumor subregions from multi-modality MRIs. The axial attention mechanism was employed to capture richer semantic information, which makes it easier for models to provide local–global contextual information by incorporating local and global feature representations while simplifying the computational complexity. The deep supervision mechanism is employed to avoid vanishing gradients and guide the AABTS-Net to generate better feature representations. The hybrid loss is employed in the model to handle the class imbalance of the dataset. Furthermore, we conduct comprehensive experiments on the BraTS 2019 and 2020 datasets. The proposed AABTS-Net shows greater robustness and accuracy, which signifies that the model can be employed in clinical practice and provides a new avenue for medical image segmentation systems.
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spelling pubmed-98560072023-01-21 Axial Attention Convolutional Neural Network for Brain Tumor Segmentation with Multi-Modality MRI Scans Tian, Weiwei Li, Dengwang Lv, Mengyu Huang, Pu Brain Sci Article Accurately identifying tumors from MRI scans is of the utmost importance for clinical diagnostics and when making plans regarding brain tumor treatment. However, manual segmentation is a challenging and time-consuming process in practice and exhibits a high degree of variability between doctors. Therefore, an axial attention brain tumor segmentation network was established in this paper, automatically segmenting tumor subregions from multi-modality MRIs. The axial attention mechanism was employed to capture richer semantic information, which makes it easier for models to provide local–global contextual information by incorporating local and global feature representations while simplifying the computational complexity. The deep supervision mechanism is employed to avoid vanishing gradients and guide the AABTS-Net to generate better feature representations. The hybrid loss is employed in the model to handle the class imbalance of the dataset. Furthermore, we conduct comprehensive experiments on the BraTS 2019 and 2020 datasets. The proposed AABTS-Net shows greater robustness and accuracy, which signifies that the model can be employed in clinical practice and provides a new avenue for medical image segmentation systems. MDPI 2022-12-21 /pmc/articles/PMC9856007/ /pubmed/36671994 http://dx.doi.org/10.3390/brainsci13010012 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Tian, Weiwei
Li, Dengwang
Lv, Mengyu
Huang, Pu
Axial Attention Convolutional Neural Network for Brain Tumor Segmentation with Multi-Modality MRI Scans
title Axial Attention Convolutional Neural Network for Brain Tumor Segmentation with Multi-Modality MRI Scans
title_full Axial Attention Convolutional Neural Network for Brain Tumor Segmentation with Multi-Modality MRI Scans
title_fullStr Axial Attention Convolutional Neural Network for Brain Tumor Segmentation with Multi-Modality MRI Scans
title_full_unstemmed Axial Attention Convolutional Neural Network for Brain Tumor Segmentation with Multi-Modality MRI Scans
title_short Axial Attention Convolutional Neural Network for Brain Tumor Segmentation with Multi-Modality MRI Scans
title_sort axial attention convolutional neural network for brain tumor segmentation with multi-modality mri scans
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9856007/
https://www.ncbi.nlm.nih.gov/pubmed/36671994
http://dx.doi.org/10.3390/brainsci13010012
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