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Transferability of Alzheimer Disease Polygenic Risk Score Across Populations and Its Association With Alzheimer Disease-Related Phenotypes
IMPORTANCE: Polygenic risk scores (PRSs), which aggregate the genetic effects of single-nucleotide variants identified in genome-wide association studies (GWASs), can help distinguish individuals at a high genetic risk for Alzheimer disease (AD). However, genetic studies have predominantly focused o...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Medical Association
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9856322/ https://www.ncbi.nlm.nih.gov/pubmed/36520433 http://dx.doi.org/10.1001/jamanetworkopen.2022.47162 |
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author | Jung, Sang-Hyuk Kim, Hang-Rai Chun, Min Young Jang, Hyemin Cho, Minyoung Kim, Beomsu Kim, Soyeon Jeong, Jee Hyang Yoon, Soo Jin Park, Kyung Won Kim, Eun-Joo Yoon, Bora Jang, Jae-Won Kim, Yeshin Hong, Jin Yong Choi, Seong Hye Noh, Young Kim, Ko Woon Kim, Si Eun Lee, Jin San Jung, Na-Yeon Lee, Juyoun Lee, Ae Young Kim, Byeong C. Cho, Soo Hyun Cho, Hanna Kim, Jong Hun Jung, Young Hee Lee, Dong Young Lee, Jae-Hong Lee, Eek-Sung Kim, Seung Joo Moon, So Young Son, Sang Joon Hong, Chang Hyung Bae, Jin-Sik Lee, Sunghoon Na, Duk L. Seo, Sang Won Cruchaga, Carlos Kim, Hee Jin Won, Hong-Hee |
author_facet | Jung, Sang-Hyuk Kim, Hang-Rai Chun, Min Young Jang, Hyemin Cho, Minyoung Kim, Beomsu Kim, Soyeon Jeong, Jee Hyang Yoon, Soo Jin Park, Kyung Won Kim, Eun-Joo Yoon, Bora Jang, Jae-Won Kim, Yeshin Hong, Jin Yong Choi, Seong Hye Noh, Young Kim, Ko Woon Kim, Si Eun Lee, Jin San Jung, Na-Yeon Lee, Juyoun Lee, Ae Young Kim, Byeong C. Cho, Soo Hyun Cho, Hanna Kim, Jong Hun Jung, Young Hee Lee, Dong Young Lee, Jae-Hong Lee, Eek-Sung Kim, Seung Joo Moon, So Young Son, Sang Joon Hong, Chang Hyung Bae, Jin-Sik Lee, Sunghoon Na, Duk L. Seo, Sang Won Cruchaga, Carlos Kim, Hee Jin Won, Hong-Hee |
author_sort | Jung, Sang-Hyuk |
collection | PubMed |
description | IMPORTANCE: Polygenic risk scores (PRSs), which aggregate the genetic effects of single-nucleotide variants identified in genome-wide association studies (GWASs), can help distinguish individuals at a high genetic risk for Alzheimer disease (AD). However, genetic studies have predominantly focused on populations of European ancestry. OBJECTIVE: To evaluate the transferability of a PRS for AD in the Korean population using summary statistics from a prior GWAS of European populations. DESIGN, SETTING, AND PARTICIPANTS: This cohort study developed a PRS based on the summary statistics of a large-scale GWAS of a European population (the International Genomics of Alzheimer Project; 21 982 AD cases and 41 944 controls). This PRS was tested for an association with AD dementia and its related phenotypes in 1634 Korean individuals, who were recruited from 2013 to 2019. The association of a PRS based on a GWAS of a Japanese population (the National Center for Geriatrics and Gerontology; 3962 AD cases and 4074 controls) and a transancestry meta-analysis of European and Japanese GWASs was also evaluated. Data were analyzed from December 2020 to June 2021. MAIN OUTCOMES AND MEASURES: Risk of AD dementia, amnestic mild cognitive impairment (aMCI), earlier symptom onset, and amyloid β deposition (Aβ). RESULTS: A total of 1634 Korean patients (969 women [59.3%]), including 716 individuals (43.6%) with AD dementia, 222 (13.6%) with aMCI, and 699 (42.8%) cognitively unimpaired controls, were analyzed in this study. The mean (SD) age of the participants was 71.6 (9.0) years. Higher PRS was associated with a higher risk of AD dementia independent of APOE ɛ4 status in the Korean population (OR, 1.95; 95% CI, 1.40-2.72; P < .001). Furthermore, PRS was associated with aMCI, earlier symptom onset, and Aβ deposition independent of APOE ɛ4 status. The PRS based on a transancestry meta-analysis of data sets comprising 2 distinct ancestries showed a slightly improved accuracy. CONCLUSIONS AND RELEVANCE: In this cohort study, a PRS derived from a European GWAS identified individuals at a high risk for AD dementia in the Korean population. These findings emphasize the transancestry transferability and clinical value of PRSs and suggest the importance of enriching diversity in genetic studies of AD. |
format | Online Article Text |
id | pubmed-9856322 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Medical Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-98563222023-02-01 Transferability of Alzheimer Disease Polygenic Risk Score Across Populations and Its Association With Alzheimer Disease-Related Phenotypes Jung, Sang-Hyuk Kim, Hang-Rai Chun, Min Young Jang, Hyemin Cho, Minyoung Kim, Beomsu Kim, Soyeon Jeong, Jee Hyang Yoon, Soo Jin Park, Kyung Won Kim, Eun-Joo Yoon, Bora Jang, Jae-Won Kim, Yeshin Hong, Jin Yong Choi, Seong Hye Noh, Young Kim, Ko Woon Kim, Si Eun Lee, Jin San Jung, Na-Yeon Lee, Juyoun Lee, Ae Young Kim, Byeong C. Cho, Soo Hyun Cho, Hanna Kim, Jong Hun Jung, Young Hee Lee, Dong Young Lee, Jae-Hong Lee, Eek-Sung Kim, Seung Joo Moon, So Young Son, Sang Joon Hong, Chang Hyung Bae, Jin-Sik Lee, Sunghoon Na, Duk L. Seo, Sang Won Cruchaga, Carlos Kim, Hee Jin Won, Hong-Hee JAMA Netw Open Original Investigation IMPORTANCE: Polygenic risk scores (PRSs), which aggregate the genetic effects of single-nucleotide variants identified in genome-wide association studies (GWASs), can help distinguish individuals at a high genetic risk for Alzheimer disease (AD). However, genetic studies have predominantly focused on populations of European ancestry. OBJECTIVE: To evaluate the transferability of a PRS for AD in the Korean population using summary statistics from a prior GWAS of European populations. DESIGN, SETTING, AND PARTICIPANTS: This cohort study developed a PRS based on the summary statistics of a large-scale GWAS of a European population (the International Genomics of Alzheimer Project; 21 982 AD cases and 41 944 controls). This PRS was tested for an association with AD dementia and its related phenotypes in 1634 Korean individuals, who were recruited from 2013 to 2019. The association of a PRS based on a GWAS of a Japanese population (the National Center for Geriatrics and Gerontology; 3962 AD cases and 4074 controls) and a transancestry meta-analysis of European and Japanese GWASs was also evaluated. Data were analyzed from December 2020 to June 2021. MAIN OUTCOMES AND MEASURES: Risk of AD dementia, amnestic mild cognitive impairment (aMCI), earlier symptom onset, and amyloid β deposition (Aβ). RESULTS: A total of 1634 Korean patients (969 women [59.3%]), including 716 individuals (43.6%) with AD dementia, 222 (13.6%) with aMCI, and 699 (42.8%) cognitively unimpaired controls, were analyzed in this study. The mean (SD) age of the participants was 71.6 (9.0) years. Higher PRS was associated with a higher risk of AD dementia independent of APOE ɛ4 status in the Korean population (OR, 1.95; 95% CI, 1.40-2.72; P < .001). Furthermore, PRS was associated with aMCI, earlier symptom onset, and Aβ deposition independent of APOE ɛ4 status. The PRS based on a transancestry meta-analysis of data sets comprising 2 distinct ancestries showed a slightly improved accuracy. CONCLUSIONS AND RELEVANCE: In this cohort study, a PRS derived from a European GWAS identified individuals at a high risk for AD dementia in the Korean population. These findings emphasize the transancestry transferability and clinical value of PRSs and suggest the importance of enriching diversity in genetic studies of AD. American Medical Association 2022-12-15 /pmc/articles/PMC9856322/ /pubmed/36520433 http://dx.doi.org/10.1001/jamanetworkopen.2022.47162 Text en Copyright 2022 Jung SH et al. JAMA Network Open. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the CC-BY License. |
spellingShingle | Original Investigation Jung, Sang-Hyuk Kim, Hang-Rai Chun, Min Young Jang, Hyemin Cho, Minyoung Kim, Beomsu Kim, Soyeon Jeong, Jee Hyang Yoon, Soo Jin Park, Kyung Won Kim, Eun-Joo Yoon, Bora Jang, Jae-Won Kim, Yeshin Hong, Jin Yong Choi, Seong Hye Noh, Young Kim, Ko Woon Kim, Si Eun Lee, Jin San Jung, Na-Yeon Lee, Juyoun Lee, Ae Young Kim, Byeong C. Cho, Soo Hyun Cho, Hanna Kim, Jong Hun Jung, Young Hee Lee, Dong Young Lee, Jae-Hong Lee, Eek-Sung Kim, Seung Joo Moon, So Young Son, Sang Joon Hong, Chang Hyung Bae, Jin-Sik Lee, Sunghoon Na, Duk L. Seo, Sang Won Cruchaga, Carlos Kim, Hee Jin Won, Hong-Hee Transferability of Alzheimer Disease Polygenic Risk Score Across Populations and Its Association With Alzheimer Disease-Related Phenotypes |
title | Transferability of Alzheimer Disease Polygenic Risk Score Across Populations and Its Association With Alzheimer Disease-Related Phenotypes |
title_full | Transferability of Alzheimer Disease Polygenic Risk Score Across Populations and Its Association With Alzheimer Disease-Related Phenotypes |
title_fullStr | Transferability of Alzheimer Disease Polygenic Risk Score Across Populations and Its Association With Alzheimer Disease-Related Phenotypes |
title_full_unstemmed | Transferability of Alzheimer Disease Polygenic Risk Score Across Populations and Its Association With Alzheimer Disease-Related Phenotypes |
title_short | Transferability of Alzheimer Disease Polygenic Risk Score Across Populations and Its Association With Alzheimer Disease-Related Phenotypes |
title_sort | transferability of alzheimer disease polygenic risk score across populations and its association with alzheimer disease-related phenotypes |
topic | Original Investigation |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9856322/ https://www.ncbi.nlm.nih.gov/pubmed/36520433 http://dx.doi.org/10.1001/jamanetworkopen.2022.47162 |
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