Cargando…
Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data
Limited efforts have been invested in exploring the interaction effects between genetic factors and gut microbiota on neuroticism and general happiness. The polygenic risk scores (PRS) of gut microbiota were calculated from individual-level genotype data of the UK Biobank cohort. Linear regression m...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9858947/ https://www.ncbi.nlm.nih.gov/pubmed/36672898 http://dx.doi.org/10.3390/genes14010156 |
_version_ | 1784874232544493568 |
---|---|
author | Jia, Yumeng Cheng, Shiqiang Liu, Li Cheng, Bolun Liang, Chujun Ye, Jing Chu, Xiaomeng Yao, Yao Wen, Yan Kafle, Om Prakash Zhang, Feng |
author_facet | Jia, Yumeng Cheng, Shiqiang Liu, Li Cheng, Bolun Liang, Chujun Ye, Jing Chu, Xiaomeng Yao, Yao Wen, Yan Kafle, Om Prakash Zhang, Feng |
author_sort | Jia, Yumeng |
collection | PubMed |
description | Limited efforts have been invested in exploring the interaction effects between genetic factors and gut microbiota on neuroticism and general happiness. The polygenic risk scores (PRS) of gut microbiota were calculated from individual-level genotype data of the UK Biobank cohort. Linear regression models were then used to assess the associations between individual PRS of gut microbiota and mental traits and interaction analysis was performed by PLINK2.0. KOBAS-i was used to conduct gene ontology (GO) enrichment analysis of the identified genes. We observed suggestive significant associations between neuroticism and PRS for the genus Bifidobacterium (rank-normal transformation, RNT) (beta = −1.10, P = 4.16 × 10(−3)) and the genus Desulfovibrio (RNT) (beta = 0.54, P = 7.46 × 10(−3)). PRS for the genus Bifidobacterium (hurdle binary, HB) (beta = 1.99, P = 5.24 × 10(−3)) and the genus Clostridium (RNT) (beta = 1.26, P = 9.27 × 10(−3)) were found to be suggestive positively associated with general happiness. Interaction analysis identified several significant genes that interacted with gut microbiota, such as RORA (rs575949009, beta = −45.00, P = 1.82 × 10(−9)) for neuroticism and ASTN2 (rs36005728, beta = 19.15, P = 3.37 × 10(−8)) for general happiness. Our study results support the genetic effects of gut microbiota on the development of neuroticism and general happiness. |
format | Online Article Text |
id | pubmed-9858947 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-98589472023-01-21 Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data Jia, Yumeng Cheng, Shiqiang Liu, Li Cheng, Bolun Liang, Chujun Ye, Jing Chu, Xiaomeng Yao, Yao Wen, Yan Kafle, Om Prakash Zhang, Feng Genes (Basel) Article Limited efforts have been invested in exploring the interaction effects between genetic factors and gut microbiota on neuroticism and general happiness. The polygenic risk scores (PRS) of gut microbiota were calculated from individual-level genotype data of the UK Biobank cohort. Linear regression models were then used to assess the associations between individual PRS of gut microbiota and mental traits and interaction analysis was performed by PLINK2.0. KOBAS-i was used to conduct gene ontology (GO) enrichment analysis of the identified genes. We observed suggestive significant associations between neuroticism and PRS for the genus Bifidobacterium (rank-normal transformation, RNT) (beta = −1.10, P = 4.16 × 10(−3)) and the genus Desulfovibrio (RNT) (beta = 0.54, P = 7.46 × 10(−3)). PRS for the genus Bifidobacterium (hurdle binary, HB) (beta = 1.99, P = 5.24 × 10(−3)) and the genus Clostridium (RNT) (beta = 1.26, P = 9.27 × 10(−3)) were found to be suggestive positively associated with general happiness. Interaction analysis identified several significant genes that interacted with gut microbiota, such as RORA (rs575949009, beta = −45.00, P = 1.82 × 10(−9)) for neuroticism and ASTN2 (rs36005728, beta = 19.15, P = 3.37 × 10(−8)) for general happiness. Our study results support the genetic effects of gut microbiota on the development of neuroticism and general happiness. MDPI 2023-01-06 /pmc/articles/PMC9858947/ /pubmed/36672898 http://dx.doi.org/10.3390/genes14010156 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Jia, Yumeng Cheng, Shiqiang Liu, Li Cheng, Bolun Liang, Chujun Ye, Jing Chu, Xiaomeng Yao, Yao Wen, Yan Kafle, Om Prakash Zhang, Feng Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data |
title | Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data |
title_full | Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data |
title_fullStr | Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data |
title_full_unstemmed | Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data |
title_short | Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data |
title_sort | evaluating the genetic effects of gut microbiota on the development of neuroticism and general happiness: a polygenic score analysis and interaction study using uk biobank data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9858947/ https://www.ncbi.nlm.nih.gov/pubmed/36672898 http://dx.doi.org/10.3390/genes14010156 |
work_keys_str_mv | AT jiayumeng evaluatingthegeneticeffectsofgutmicrobiotaonthedevelopmentofneuroticismandgeneralhappinessapolygenicscoreanalysisandinteractionstudyusingukbiobankdata AT chengshiqiang evaluatingthegeneticeffectsofgutmicrobiotaonthedevelopmentofneuroticismandgeneralhappinessapolygenicscoreanalysisandinteractionstudyusingukbiobankdata AT liuli evaluatingthegeneticeffectsofgutmicrobiotaonthedevelopmentofneuroticismandgeneralhappinessapolygenicscoreanalysisandinteractionstudyusingukbiobankdata AT chengbolun evaluatingthegeneticeffectsofgutmicrobiotaonthedevelopmentofneuroticismandgeneralhappinessapolygenicscoreanalysisandinteractionstudyusingukbiobankdata AT liangchujun evaluatingthegeneticeffectsofgutmicrobiotaonthedevelopmentofneuroticismandgeneralhappinessapolygenicscoreanalysisandinteractionstudyusingukbiobankdata AT yejing evaluatingthegeneticeffectsofgutmicrobiotaonthedevelopmentofneuroticismandgeneralhappinessapolygenicscoreanalysisandinteractionstudyusingukbiobankdata AT chuxiaomeng evaluatingthegeneticeffectsofgutmicrobiotaonthedevelopmentofneuroticismandgeneralhappinessapolygenicscoreanalysisandinteractionstudyusingukbiobankdata AT yaoyao evaluatingthegeneticeffectsofgutmicrobiotaonthedevelopmentofneuroticismandgeneralhappinessapolygenicscoreanalysisandinteractionstudyusingukbiobankdata AT wenyan evaluatingthegeneticeffectsofgutmicrobiotaonthedevelopmentofneuroticismandgeneralhappinessapolygenicscoreanalysisandinteractionstudyusingukbiobankdata AT kafleomprakash evaluatingthegeneticeffectsofgutmicrobiotaonthedevelopmentofneuroticismandgeneralhappinessapolygenicscoreanalysisandinteractionstudyusingukbiobankdata AT zhangfeng evaluatingthegeneticeffectsofgutmicrobiotaonthedevelopmentofneuroticismandgeneralhappinessapolygenicscoreanalysisandinteractionstudyusingukbiobankdata |