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Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data

Limited efforts have been invested in exploring the interaction effects between genetic factors and gut microbiota on neuroticism and general happiness. The polygenic risk scores (PRS) of gut microbiota were calculated from individual-level genotype data of the UK Biobank cohort. Linear regression m...

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Autores principales: Jia, Yumeng, Cheng, Shiqiang, Liu, Li, Cheng, Bolun, Liang, Chujun, Ye, Jing, Chu, Xiaomeng, Yao, Yao, Wen, Yan, Kafle, Om Prakash, Zhang, Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9858947/
https://www.ncbi.nlm.nih.gov/pubmed/36672898
http://dx.doi.org/10.3390/genes14010156
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author Jia, Yumeng
Cheng, Shiqiang
Liu, Li
Cheng, Bolun
Liang, Chujun
Ye, Jing
Chu, Xiaomeng
Yao, Yao
Wen, Yan
Kafle, Om Prakash
Zhang, Feng
author_facet Jia, Yumeng
Cheng, Shiqiang
Liu, Li
Cheng, Bolun
Liang, Chujun
Ye, Jing
Chu, Xiaomeng
Yao, Yao
Wen, Yan
Kafle, Om Prakash
Zhang, Feng
author_sort Jia, Yumeng
collection PubMed
description Limited efforts have been invested in exploring the interaction effects between genetic factors and gut microbiota on neuroticism and general happiness. The polygenic risk scores (PRS) of gut microbiota were calculated from individual-level genotype data of the UK Biobank cohort. Linear regression models were then used to assess the associations between individual PRS of gut microbiota and mental traits and interaction analysis was performed by PLINK2.0. KOBAS-i was used to conduct gene ontology (GO) enrichment analysis of the identified genes. We observed suggestive significant associations between neuroticism and PRS for the genus Bifidobacterium (rank-normal transformation, RNT) (beta = −1.10, P = 4.16 × 10(−3)) and the genus Desulfovibrio (RNT) (beta = 0.54, P = 7.46 × 10(−3)). PRS for the genus Bifidobacterium (hurdle binary, HB) (beta = 1.99, P = 5.24 × 10(−3)) and the genus Clostridium (RNT) (beta = 1.26, P = 9.27 × 10(−3)) were found to be suggestive positively associated with general happiness. Interaction analysis identified several significant genes that interacted with gut microbiota, such as RORA (rs575949009, beta = −45.00, P = 1.82 × 10(−9)) for neuroticism and ASTN2 (rs36005728, beta = 19.15, P = 3.37 × 10(−8)) for general happiness. Our study results support the genetic effects of gut microbiota on the development of neuroticism and general happiness.
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spelling pubmed-98589472023-01-21 Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data Jia, Yumeng Cheng, Shiqiang Liu, Li Cheng, Bolun Liang, Chujun Ye, Jing Chu, Xiaomeng Yao, Yao Wen, Yan Kafle, Om Prakash Zhang, Feng Genes (Basel) Article Limited efforts have been invested in exploring the interaction effects between genetic factors and gut microbiota on neuroticism and general happiness. The polygenic risk scores (PRS) of gut microbiota were calculated from individual-level genotype data of the UK Biobank cohort. Linear regression models were then used to assess the associations between individual PRS of gut microbiota and mental traits and interaction analysis was performed by PLINK2.0. KOBAS-i was used to conduct gene ontology (GO) enrichment analysis of the identified genes. We observed suggestive significant associations between neuroticism and PRS for the genus Bifidobacterium (rank-normal transformation, RNT) (beta = −1.10, P = 4.16 × 10(−3)) and the genus Desulfovibrio (RNT) (beta = 0.54, P = 7.46 × 10(−3)). PRS for the genus Bifidobacterium (hurdle binary, HB) (beta = 1.99, P = 5.24 × 10(−3)) and the genus Clostridium (RNT) (beta = 1.26, P = 9.27 × 10(−3)) were found to be suggestive positively associated with general happiness. Interaction analysis identified several significant genes that interacted with gut microbiota, such as RORA (rs575949009, beta = −45.00, P = 1.82 × 10(−9)) for neuroticism and ASTN2 (rs36005728, beta = 19.15, P = 3.37 × 10(−8)) for general happiness. Our study results support the genetic effects of gut microbiota on the development of neuroticism and general happiness. MDPI 2023-01-06 /pmc/articles/PMC9858947/ /pubmed/36672898 http://dx.doi.org/10.3390/genes14010156 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Jia, Yumeng
Cheng, Shiqiang
Liu, Li
Cheng, Bolun
Liang, Chujun
Ye, Jing
Chu, Xiaomeng
Yao, Yao
Wen, Yan
Kafle, Om Prakash
Zhang, Feng
Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data
title Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data
title_full Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data
title_fullStr Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data
title_full_unstemmed Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data
title_short Evaluating the Genetic Effects of Gut Microbiota on the Development of Neuroticism and General Happiness: A Polygenic Score Analysis and Interaction Study Using UK Biobank Data
title_sort evaluating the genetic effects of gut microbiota on the development of neuroticism and general happiness: a polygenic score analysis and interaction study using uk biobank data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9858947/
https://www.ncbi.nlm.nih.gov/pubmed/36672898
http://dx.doi.org/10.3390/genes14010156
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