Cargando…

The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years

Satellite DNAs (satDNAs) are tandemly repeated sequences that are usually located on the heterochromatin, and the entire collection of satDNAs within a genome is called satellitome. Primarily, these sequences are not under selective pressure and evolve by concerted evolution, resulting in elevated r...

Descripción completa

Detalles Bibliográficos
Autores principales: Goes, Caio Augusto Gomes, dos Santos, Natalia, Rodrigues, Pedro Henrique de Mira, Stornioli, José Henrique Forte, da Silva, Amanda Bueno, dos Santos, Rodrigo Zeni, Vidal, Jhon Alex Dziechciarz, Silva, Duílio Mazzoni Zerbinato de Andrade, Artoni, Roberto Ferreira, Foresti, Fausto, Hashimoto, Diogo Teruo, Porto-Foresti, Fábio, Utsunomia, Ricardo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9859320/
https://www.ncbi.nlm.nih.gov/pubmed/36672835
http://dx.doi.org/10.3390/genes14010091
_version_ 1784874325841543168
author Goes, Caio Augusto Gomes
dos Santos, Natalia
Rodrigues, Pedro Henrique de Mira
Stornioli, José Henrique Forte
da Silva, Amanda Bueno
dos Santos, Rodrigo Zeni
Vidal, Jhon Alex Dziechciarz
Silva, Duílio Mazzoni Zerbinato de Andrade
Artoni, Roberto Ferreira
Foresti, Fausto
Hashimoto, Diogo Teruo
Porto-Foresti, Fábio
Utsunomia, Ricardo
author_facet Goes, Caio Augusto Gomes
dos Santos, Natalia
Rodrigues, Pedro Henrique de Mira
Stornioli, José Henrique Forte
da Silva, Amanda Bueno
dos Santos, Rodrigo Zeni
Vidal, Jhon Alex Dziechciarz
Silva, Duílio Mazzoni Zerbinato de Andrade
Artoni, Roberto Ferreira
Foresti, Fausto
Hashimoto, Diogo Teruo
Porto-Foresti, Fábio
Utsunomia, Ricardo
author_sort Goes, Caio Augusto Gomes
collection PubMed
description Satellite DNAs (satDNAs) are tandemly repeated sequences that are usually located on the heterochromatin, and the entire collection of satDNAs within a genome is called satellitome. Primarily, these sequences are not under selective pressure and evolve by concerted evolution, resulting in elevated rates of divergence between the satDNA profiles of reproductive isolated species/populations. Here, we characterized two additional satellitomes of Characiformes fish (Colossoma macropomum and Piaractus mesopotamicus) that diverged approximately 30 million years ago, while still retaining conserved karyotype features. The results we obtained indicated that several satDNAs (50% of satellite sequences in P. mesopotamicus and 43% in C. macropomum) show levels of conservation between the analyzed species, in the nucleotide and chromosomal levels. We propose that long-life cycles and few genomic changes could slow down rates of satDNA differentiation.
format Online
Article
Text
id pubmed-9859320
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-98593202023-01-21 The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years Goes, Caio Augusto Gomes dos Santos, Natalia Rodrigues, Pedro Henrique de Mira Stornioli, José Henrique Forte da Silva, Amanda Bueno dos Santos, Rodrigo Zeni Vidal, Jhon Alex Dziechciarz Silva, Duílio Mazzoni Zerbinato de Andrade Artoni, Roberto Ferreira Foresti, Fausto Hashimoto, Diogo Teruo Porto-Foresti, Fábio Utsunomia, Ricardo Genes (Basel) Article Satellite DNAs (satDNAs) are tandemly repeated sequences that are usually located on the heterochromatin, and the entire collection of satDNAs within a genome is called satellitome. Primarily, these sequences are not under selective pressure and evolve by concerted evolution, resulting in elevated rates of divergence between the satDNA profiles of reproductive isolated species/populations. Here, we characterized two additional satellitomes of Characiformes fish (Colossoma macropomum and Piaractus mesopotamicus) that diverged approximately 30 million years ago, while still retaining conserved karyotype features. The results we obtained indicated that several satDNAs (50% of satellite sequences in P. mesopotamicus and 43% in C. macropomum) show levels of conservation between the analyzed species, in the nucleotide and chromosomal levels. We propose that long-life cycles and few genomic changes could slow down rates of satDNA differentiation. MDPI 2022-12-28 /pmc/articles/PMC9859320/ /pubmed/36672835 http://dx.doi.org/10.3390/genes14010091 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Goes, Caio Augusto Gomes
dos Santos, Natalia
Rodrigues, Pedro Henrique de Mira
Stornioli, José Henrique Forte
da Silva, Amanda Bueno
dos Santos, Rodrigo Zeni
Vidal, Jhon Alex Dziechciarz
Silva, Duílio Mazzoni Zerbinato de Andrade
Artoni, Roberto Ferreira
Foresti, Fausto
Hashimoto, Diogo Teruo
Porto-Foresti, Fábio
Utsunomia, Ricardo
The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years
title The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years
title_full The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years
title_fullStr The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years
title_full_unstemmed The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years
title_short The Satellite DNA Catalogues of Two Serrasalmidae (Teleostei, Characiformes): Conservation of General satDNA Features over 30 Million Years
title_sort satellite dna catalogues of two serrasalmidae (teleostei, characiformes): conservation of general satdna features over 30 million years
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9859320/
https://www.ncbi.nlm.nih.gov/pubmed/36672835
http://dx.doi.org/10.3390/genes14010091
work_keys_str_mv AT goescaioaugustogomes thesatellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT dossantosnatalia thesatellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT rodriguespedrohenriquedemira thesatellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT storniolijosehenriqueforte thesatellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT dasilvaamandabueno thesatellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT dossantosrodrigozeni thesatellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT vidaljhonalexdziechciarz thesatellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT silvaduiliomazzonizerbinatodeandrade thesatellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT artonirobertoferreira thesatellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT forestifausto thesatellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT hashimotodiogoteruo thesatellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT portoforestifabio thesatellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT utsunomiaricardo thesatellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT goescaioaugustogomes satellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT dossantosnatalia satellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT rodriguespedrohenriquedemira satellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT storniolijosehenriqueforte satellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT dasilvaamandabueno satellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT dossantosrodrigozeni satellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT vidaljhonalexdziechciarz satellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT silvaduiliomazzonizerbinatodeandrade satellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT artonirobertoferreira satellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT forestifausto satellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT hashimotodiogoteruo satellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT portoforestifabio satellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears
AT utsunomiaricardo satellitednacataloguesoftwoserrasalmidaeteleosteicharaciformesconservationofgeneralsatdnafeaturesover30millionyears