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Fully automatic tumor segmentation of breast ultrasound images with deep learning

BACKGROUND: Breast ultrasound (BUS) imaging is one of the most prevalent approaches for the detection of breast cancers. Tumor segmentation of BUS images can facilitate doctors in localizing tumors and is a necessary step for computer‐aided diagnosis systems. While the majority of clinical BUS scans...

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Autores principales: Zhang, Shuai, Liao, Mei, Wang, Jing, Zhu, Yongyi, Zhang, Yanling, Zhang, Jian, Zheng, Rongqin, Lv, Linyang, Zhu, Dejiang, Chen, Hao, Wang, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9859996/
https://www.ncbi.nlm.nih.gov/pubmed/36495018
http://dx.doi.org/10.1002/acm2.13863
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author Zhang, Shuai
Liao, Mei
Wang, Jing
Zhu, Yongyi
Zhang, Yanling
Zhang, Jian
Zheng, Rongqin
Lv, Linyang
Zhu, Dejiang
Chen, Hao
Wang, Wei
author_facet Zhang, Shuai
Liao, Mei
Wang, Jing
Zhu, Yongyi
Zhang, Yanling
Zhang, Jian
Zheng, Rongqin
Lv, Linyang
Zhu, Dejiang
Chen, Hao
Wang, Wei
author_sort Zhang, Shuai
collection PubMed
description BACKGROUND: Breast ultrasound (BUS) imaging is one of the most prevalent approaches for the detection of breast cancers. Tumor segmentation of BUS images can facilitate doctors in localizing tumors and is a necessary step for computer‐aided diagnosis systems. While the majority of clinical BUS scans are normal ones without tumors, segmentation approaches such as U‐Net often predict mass regions for these images. Such false‐positive problem becomes serious if a fully automatic artificial intelligence system is used for routine screening. METHODS: In this study, we proposed a novel model which is more suitable for routine BUS screening. The model contains a classification branch that determines whether the image is normal or with tumors, and a segmentation branch that outlines tumors. Two branches share the same encoder network. We also built a new dataset that contains 1600 BUS images from 625 patients for training and a testing dataset with 130 images from 120 patients for testing. The dataset is the largest one with pixel‐wise masks manually segmented by experienced radiologists. Our code is available at https://github.com/szhangNJU/BUS_segmentation. RESULTS: The area under the receiver operating characteristic curve (AUC) for classifying images into normal/abnormal categories was 0.991. The dice similarity coefficient (DSC) for segmentation of mass regions was 0.898, better than the state‐of‐the‐art models. Testing on an external dataset gave a similar performance, demonstrating a good transferability of our model. Moreover, we simulated the use of the model in actual clinic practice by processing videos recorded during BUS scans; the model gave very low false‐positive predictions on normal images without sacrificing sensitivities for images with tumors. CONCLUSIONS: Our model achieved better segmentation performance than the state‐of‐the‐art models and showed a good transferability on an external test set. The proposed deep learning architecture holds potential for use in fully automatic BUS health screening.
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spelling pubmed-98599962023-01-24 Fully automatic tumor segmentation of breast ultrasound images with deep learning Zhang, Shuai Liao, Mei Wang, Jing Zhu, Yongyi Zhang, Yanling Zhang, Jian Zheng, Rongqin Lv, Linyang Zhu, Dejiang Chen, Hao Wang, Wei J Appl Clin Med Phys Medical Imaging BACKGROUND: Breast ultrasound (BUS) imaging is one of the most prevalent approaches for the detection of breast cancers. Tumor segmentation of BUS images can facilitate doctors in localizing tumors and is a necessary step for computer‐aided diagnosis systems. While the majority of clinical BUS scans are normal ones without tumors, segmentation approaches such as U‐Net often predict mass regions for these images. Such false‐positive problem becomes serious if a fully automatic artificial intelligence system is used for routine screening. METHODS: In this study, we proposed a novel model which is more suitable for routine BUS screening. The model contains a classification branch that determines whether the image is normal or with tumors, and a segmentation branch that outlines tumors. Two branches share the same encoder network. We also built a new dataset that contains 1600 BUS images from 625 patients for training and a testing dataset with 130 images from 120 patients for testing. The dataset is the largest one with pixel‐wise masks manually segmented by experienced radiologists. Our code is available at https://github.com/szhangNJU/BUS_segmentation. RESULTS: The area under the receiver operating characteristic curve (AUC) for classifying images into normal/abnormal categories was 0.991. The dice similarity coefficient (DSC) for segmentation of mass regions was 0.898, better than the state‐of‐the‐art models. Testing on an external dataset gave a similar performance, demonstrating a good transferability of our model. Moreover, we simulated the use of the model in actual clinic practice by processing videos recorded during BUS scans; the model gave very low false‐positive predictions on normal images without sacrificing sensitivities for images with tumors. CONCLUSIONS: Our model achieved better segmentation performance than the state‐of‐the‐art models and showed a good transferability on an external test set. The proposed deep learning architecture holds potential for use in fully automatic BUS health screening. John Wiley and Sons Inc. 2022-12-09 /pmc/articles/PMC9859996/ /pubmed/36495018 http://dx.doi.org/10.1002/acm2.13863 Text en © 2022 The Authors. Journal of Applied Clinical Medical Physics published by Wiley Periodicals, LLC on behalf of The American Association of Physicists in Medicine. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Medical Imaging
Zhang, Shuai
Liao, Mei
Wang, Jing
Zhu, Yongyi
Zhang, Yanling
Zhang, Jian
Zheng, Rongqin
Lv, Linyang
Zhu, Dejiang
Chen, Hao
Wang, Wei
Fully automatic tumor segmentation of breast ultrasound images with deep learning
title Fully automatic tumor segmentation of breast ultrasound images with deep learning
title_full Fully automatic tumor segmentation of breast ultrasound images with deep learning
title_fullStr Fully automatic tumor segmentation of breast ultrasound images with deep learning
title_full_unstemmed Fully automatic tumor segmentation of breast ultrasound images with deep learning
title_short Fully automatic tumor segmentation of breast ultrasound images with deep learning
title_sort fully automatic tumor segmentation of breast ultrasound images with deep learning
topic Medical Imaging
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9859996/
https://www.ncbi.nlm.nih.gov/pubmed/36495018
http://dx.doi.org/10.1002/acm2.13863
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