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Evolutionary Analysis of StSnRK2 Family Genes and Their Overexpression in Transgenic Tobacco Improve Drought Tolerance

Sucrose non-ferment 1-related protein kinase 2 (SnRK2) is a highly conserved protein kinase in plants that plays an important role in regulating plant response to drought stress. Although it has been reported in some plants, the evolutionary relationship of potato SnRK2s and their function in drough...

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Autores principales: Yao, Panfeng, Sun, Lei, Dekomah, Simon, Bi, Zhenzhen, Sun, Chao, Mao, Juan, Zhang, Chunli, Qin, Tianyuan, Wang, Yihao, Liu, Yuhui, Liu, Zhen, Ali, Kazim, Bai, Jiangping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9861535/
https://www.ncbi.nlm.nih.gov/pubmed/36674521
http://dx.doi.org/10.3390/ijms24021000
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author Yao, Panfeng
Sun, Lei
Dekomah, Simon
Bi, Zhenzhen
Sun, Chao
Mao, Juan
Zhang, Chunli
Qin, Tianyuan
Wang, Yihao
Liu, Yuhui
Liu, Zhen
Ali, Kazim
Bai, Jiangping
author_facet Yao, Panfeng
Sun, Lei
Dekomah, Simon
Bi, Zhenzhen
Sun, Chao
Mao, Juan
Zhang, Chunli
Qin, Tianyuan
Wang, Yihao
Liu, Yuhui
Liu, Zhen
Ali, Kazim
Bai, Jiangping
author_sort Yao, Panfeng
collection PubMed
description Sucrose non-ferment 1-related protein kinase 2 (SnRK2) is a highly conserved protein kinase in plants that plays an important role in regulating plant response to drought stress. Although it has been reported in some plants, the evolutionary relationship of potato SnRK2s and their function in drought resistance have not been systematically analyzed. In this study, molecular characteristic analysis showed that 8 StSnRK2s were distributed on six chromosomes, coding proteins were divided into three subgroups, and StSnRK2s clustered in the same subgroup had similar conserved motifs and domains. In addition, StSnRK2 has a wide range of replication events in some species, making it closer to dicots in the process of evolution. In addition, the average nonsynonymous substitution rate/synonymous substitution rate (Ka/Ks) value of SnRK2s in monocots was higher than that of dicots. The codon usage index showed that SnRK2s prefer to use cytosine 3 (C3s), guanine 3 (G3s) and GC content (GC3s) in monocots, whereas thymine 3 (T3s) and adenine 3 (A3s) are preferred in dicots. Furthermore, stress response analysis showed that the expression of StSnRK2s under different degrees of drought stress significantly correlated with one or more stress-related physiological indices, such as proline and malondialdehyde (MDA) content, superoxide dismutase (SOD) and catalase (CAT) activity, ion leakage (IL) etc. The drought resistance of StSnRK2 transgenic plants was determined to occur in the order of StSnRK2.1/2.8 > StSnRK2.2/2.5 > StSnRK2.4/2.6 > StSnRK2.3 > StSnRK2.7, was attributed to not only lower IL but also higher proline, soluble sugar contents and stress-related genes in transgenic plants compared to wild type (WT). In conclusion, this study provides useful insights into the evolution and function of StSnRK2s and lays a foundation for further study on the molecular mechanism of StSnRK2s regulating potato drought resistance.
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spelling pubmed-98615352023-01-22 Evolutionary Analysis of StSnRK2 Family Genes and Their Overexpression in Transgenic Tobacco Improve Drought Tolerance Yao, Panfeng Sun, Lei Dekomah, Simon Bi, Zhenzhen Sun, Chao Mao, Juan Zhang, Chunli Qin, Tianyuan Wang, Yihao Liu, Yuhui Liu, Zhen Ali, Kazim Bai, Jiangping Int J Mol Sci Article Sucrose non-ferment 1-related protein kinase 2 (SnRK2) is a highly conserved protein kinase in plants that plays an important role in regulating plant response to drought stress. Although it has been reported in some plants, the evolutionary relationship of potato SnRK2s and their function in drought resistance have not been systematically analyzed. In this study, molecular characteristic analysis showed that 8 StSnRK2s were distributed on six chromosomes, coding proteins were divided into three subgroups, and StSnRK2s clustered in the same subgroup had similar conserved motifs and domains. In addition, StSnRK2 has a wide range of replication events in some species, making it closer to dicots in the process of evolution. In addition, the average nonsynonymous substitution rate/synonymous substitution rate (Ka/Ks) value of SnRK2s in monocots was higher than that of dicots. The codon usage index showed that SnRK2s prefer to use cytosine 3 (C3s), guanine 3 (G3s) and GC content (GC3s) in monocots, whereas thymine 3 (T3s) and adenine 3 (A3s) are preferred in dicots. Furthermore, stress response analysis showed that the expression of StSnRK2s under different degrees of drought stress significantly correlated with one or more stress-related physiological indices, such as proline and malondialdehyde (MDA) content, superoxide dismutase (SOD) and catalase (CAT) activity, ion leakage (IL) etc. The drought resistance of StSnRK2 transgenic plants was determined to occur in the order of StSnRK2.1/2.8 > StSnRK2.2/2.5 > StSnRK2.4/2.6 > StSnRK2.3 > StSnRK2.7, was attributed to not only lower IL but also higher proline, soluble sugar contents and stress-related genes in transgenic plants compared to wild type (WT). In conclusion, this study provides useful insights into the evolution and function of StSnRK2s and lays a foundation for further study on the molecular mechanism of StSnRK2s regulating potato drought resistance. MDPI 2023-01-05 /pmc/articles/PMC9861535/ /pubmed/36674521 http://dx.doi.org/10.3390/ijms24021000 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Yao, Panfeng
Sun, Lei
Dekomah, Simon
Bi, Zhenzhen
Sun, Chao
Mao, Juan
Zhang, Chunli
Qin, Tianyuan
Wang, Yihao
Liu, Yuhui
Liu, Zhen
Ali, Kazim
Bai, Jiangping
Evolutionary Analysis of StSnRK2 Family Genes and Their Overexpression in Transgenic Tobacco Improve Drought Tolerance
title Evolutionary Analysis of StSnRK2 Family Genes and Their Overexpression in Transgenic Tobacco Improve Drought Tolerance
title_full Evolutionary Analysis of StSnRK2 Family Genes and Their Overexpression in Transgenic Tobacco Improve Drought Tolerance
title_fullStr Evolutionary Analysis of StSnRK2 Family Genes and Their Overexpression in Transgenic Tobacco Improve Drought Tolerance
title_full_unstemmed Evolutionary Analysis of StSnRK2 Family Genes and Their Overexpression in Transgenic Tobacco Improve Drought Tolerance
title_short Evolutionary Analysis of StSnRK2 Family Genes and Their Overexpression in Transgenic Tobacco Improve Drought Tolerance
title_sort evolutionary analysis of stsnrk2 family genes and their overexpression in transgenic tobacco improve drought tolerance
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9861535/
https://www.ncbi.nlm.nih.gov/pubmed/36674521
http://dx.doi.org/10.3390/ijms24021000
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