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HMNet: Hierarchical Multi-Scale Brain Tumor Segmentation Network
An accurate and efficient automatic brain tumor segmentation algorithm is important for clinical practice. In recent years, there has been much interest in automatic segmentation algorithms that use convolutional neural networks. In this paper, we propose a novel hierarchical multi-scale segmentatio...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9861819/ https://www.ncbi.nlm.nih.gov/pubmed/36675470 http://dx.doi.org/10.3390/jcm12020538 |
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author | Zhang, Ruifeng Jia, Shasha Adamu, Mohammed Jajere Nie, Weizhi Li, Qiang Wu, Ting |
author_facet | Zhang, Ruifeng Jia, Shasha Adamu, Mohammed Jajere Nie, Weizhi Li, Qiang Wu, Ting |
author_sort | Zhang, Ruifeng |
collection | PubMed |
description | An accurate and efficient automatic brain tumor segmentation algorithm is important for clinical practice. In recent years, there has been much interest in automatic segmentation algorithms that use convolutional neural networks. In this paper, we propose a novel hierarchical multi-scale segmentation network (HMNet), which contains a high-resolution branch and parallel multi-resolution branches. The high-resolution branch can keep track of the brain tumor’s spatial details, and the multi-resolution feature exchange and fusion allow the network’s receptive fields to adapt to brain tumors of different shapes and sizes. In particular, to overcome the large computational overhead caused by expensive 3D convolution, we propose a lightweight conditional channel weighting block to reduce GPU memory and improve the efficiency of HMNet. We also propose a lightweight multi-resolution feature fusion (LMRF) module to further reduce model complexity and reduce the redundancy of the feature maps. We run tests on the BraTS 2020 dataset to determine how well the proposed network would work. The dice similarity coefficients of HMNet for ET, WT, and TC are 0.781, 0.901, and 0.823, respectively. Many comparative experiments on the BraTS 2020 dataset and other two datasets show that our proposed HMNet has achieved satisfactory performance compared with the SOTA approaches. |
format | Online Article Text |
id | pubmed-9861819 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-98618192023-01-22 HMNet: Hierarchical Multi-Scale Brain Tumor Segmentation Network Zhang, Ruifeng Jia, Shasha Adamu, Mohammed Jajere Nie, Weizhi Li, Qiang Wu, Ting J Clin Med Article An accurate and efficient automatic brain tumor segmentation algorithm is important for clinical practice. In recent years, there has been much interest in automatic segmentation algorithms that use convolutional neural networks. In this paper, we propose a novel hierarchical multi-scale segmentation network (HMNet), which contains a high-resolution branch and parallel multi-resolution branches. The high-resolution branch can keep track of the brain tumor’s spatial details, and the multi-resolution feature exchange and fusion allow the network’s receptive fields to adapt to brain tumors of different shapes and sizes. In particular, to overcome the large computational overhead caused by expensive 3D convolution, we propose a lightweight conditional channel weighting block to reduce GPU memory and improve the efficiency of HMNet. We also propose a lightweight multi-resolution feature fusion (LMRF) module to further reduce model complexity and reduce the redundancy of the feature maps. We run tests on the BraTS 2020 dataset to determine how well the proposed network would work. The dice similarity coefficients of HMNet for ET, WT, and TC are 0.781, 0.901, and 0.823, respectively. Many comparative experiments on the BraTS 2020 dataset and other two datasets show that our proposed HMNet has achieved satisfactory performance compared with the SOTA approaches. MDPI 2023-01-09 /pmc/articles/PMC9861819/ /pubmed/36675470 http://dx.doi.org/10.3390/jcm12020538 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhang, Ruifeng Jia, Shasha Adamu, Mohammed Jajere Nie, Weizhi Li, Qiang Wu, Ting HMNet: Hierarchical Multi-Scale Brain Tumor Segmentation Network |
title | HMNet: Hierarchical Multi-Scale Brain Tumor Segmentation Network |
title_full | HMNet: Hierarchical Multi-Scale Brain Tumor Segmentation Network |
title_fullStr | HMNet: Hierarchical Multi-Scale Brain Tumor Segmentation Network |
title_full_unstemmed | HMNet: Hierarchical Multi-Scale Brain Tumor Segmentation Network |
title_short | HMNet: Hierarchical Multi-Scale Brain Tumor Segmentation Network |
title_sort | hmnet: hierarchical multi-scale brain tumor segmentation network |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9861819/ https://www.ncbi.nlm.nih.gov/pubmed/36675470 http://dx.doi.org/10.3390/jcm12020538 |
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