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Development of highly accurate digital PCR method and reference material for monkeypox virus detection
Human monkeypox has attracted attention recently. Monkeypox virus (MPXV) keeps evolving as it spreading around the world rapidly, which may threaten the health of more and more people. Here, we have developed a high order reference method based on digital PCR (dPCR) for MPXV detection, of which the...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9862235/ https://www.ncbi.nlm.nih.gov/pubmed/36680591 http://dx.doi.org/10.1007/s00216-023-04518-9 |
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author | Yang, Jiayi Guo, Ruohui Li, Huijie Chen, Guifang Lin, Yanmin Wang, Xia Niu, Chunyan Dong, Lianhua |
author_facet | Yang, Jiayi Guo, Ruohui Li, Huijie Chen, Guifang Lin, Yanmin Wang, Xia Niu, Chunyan Dong, Lianhua |
author_sort | Yang, Jiayi |
collection | PubMed |
description | Human monkeypox has attracted attention recently. Monkeypox virus (MPXV) keeps evolving as it spreading around the world rapidly, which may threaten the health of more and more people. Here, we have developed a high order reference method based on digital PCR (dPCR) for MPXV detection, of which the limits of quantification (LoQ) and detection (LoD) are 38 and 6 copies/reaction, respectively. Pseudovirus reference materials (RM) containing the conserved F3L gene has been developed, and the homogeneity assessment showed that the RM was homogeneous. The reference value with its expanded uncertainty determined by the established dPCR is (2.74 ± 0.46) × 10(3) copies/μL. Six different MPXV test kits were accessed by the RM. Four out of six test kits cannot reach their claimed LoDs. The poor analytical sensitivity might cause false-negative results, which lead to incorrect diagnosis and treatment. The establishment of a high order reference method of dPCR and pseudovirus RM is very useful for improving the accuracy and reliability of MPXV detection. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00216-023-04518-9. |
format | Online Article Text |
id | pubmed-9862235 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-98622352023-01-23 Development of highly accurate digital PCR method and reference material for monkeypox virus detection Yang, Jiayi Guo, Ruohui Li, Huijie Chen, Guifang Lin, Yanmin Wang, Xia Niu, Chunyan Dong, Lianhua Anal Bioanal Chem Research Paper Human monkeypox has attracted attention recently. Monkeypox virus (MPXV) keeps evolving as it spreading around the world rapidly, which may threaten the health of more and more people. Here, we have developed a high order reference method based on digital PCR (dPCR) for MPXV detection, of which the limits of quantification (LoQ) and detection (LoD) are 38 and 6 copies/reaction, respectively. Pseudovirus reference materials (RM) containing the conserved F3L gene has been developed, and the homogeneity assessment showed that the RM was homogeneous. The reference value with its expanded uncertainty determined by the established dPCR is (2.74 ± 0.46) × 10(3) copies/μL. Six different MPXV test kits were accessed by the RM. Four out of six test kits cannot reach their claimed LoDs. The poor analytical sensitivity might cause false-negative results, which lead to incorrect diagnosis and treatment. The establishment of a high order reference method of dPCR and pseudovirus RM is very useful for improving the accuracy and reliability of MPXV detection. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00216-023-04518-9. Springer Berlin Heidelberg 2023-01-21 2023 /pmc/articles/PMC9862235/ /pubmed/36680591 http://dx.doi.org/10.1007/s00216-023-04518-9 Text en © Springer-Verlag GmbH Germany, part of Springer Nature 2023, Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Research Paper Yang, Jiayi Guo, Ruohui Li, Huijie Chen, Guifang Lin, Yanmin Wang, Xia Niu, Chunyan Dong, Lianhua Development of highly accurate digital PCR method and reference material for monkeypox virus detection |
title | Development of highly accurate digital PCR method and reference material for monkeypox virus detection |
title_full | Development of highly accurate digital PCR method and reference material for monkeypox virus detection |
title_fullStr | Development of highly accurate digital PCR method and reference material for monkeypox virus detection |
title_full_unstemmed | Development of highly accurate digital PCR method and reference material for monkeypox virus detection |
title_short | Development of highly accurate digital PCR method and reference material for monkeypox virus detection |
title_sort | development of highly accurate digital pcr method and reference material for monkeypox virus detection |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9862235/ https://www.ncbi.nlm.nih.gov/pubmed/36680591 http://dx.doi.org/10.1007/s00216-023-04518-9 |
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