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Development of highly accurate digital PCR method and reference material for monkeypox virus detection

Human monkeypox has attracted attention recently. Monkeypox virus (MPXV) keeps evolving as it spreading around the world rapidly, which may threaten the health of more and more people. Here, we have developed a high order reference method based on digital PCR (dPCR) for MPXV detection, of which the...

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Autores principales: Yang, Jiayi, Guo, Ruohui, Li, Huijie, Chen, Guifang, Lin, Yanmin, Wang, Xia, Niu, Chunyan, Dong, Lianhua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9862235/
https://www.ncbi.nlm.nih.gov/pubmed/36680591
http://dx.doi.org/10.1007/s00216-023-04518-9
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author Yang, Jiayi
Guo, Ruohui
Li, Huijie
Chen, Guifang
Lin, Yanmin
Wang, Xia
Niu, Chunyan
Dong, Lianhua
author_facet Yang, Jiayi
Guo, Ruohui
Li, Huijie
Chen, Guifang
Lin, Yanmin
Wang, Xia
Niu, Chunyan
Dong, Lianhua
author_sort Yang, Jiayi
collection PubMed
description Human monkeypox has attracted attention recently. Monkeypox virus (MPXV) keeps evolving as it spreading around the world rapidly, which may threaten the health of more and more people. Here, we have developed a high order reference method based on digital PCR (dPCR) for MPXV detection, of which the limits of quantification (LoQ) and detection (LoD) are 38 and 6 copies/reaction, respectively. Pseudovirus reference materials (RM) containing the conserved F3L gene has been developed, and the homogeneity assessment showed that the RM was homogeneous. The reference value with its expanded uncertainty determined by the established dPCR is (2.74 ± 0.46) × 10(3) copies/μL. Six different MPXV test kits were accessed by the RM. Four out of six test kits cannot reach their claimed LoDs. The poor analytical sensitivity might cause false-negative results, which lead to incorrect diagnosis and treatment. The establishment of a high order reference method of dPCR and pseudovirus RM is very useful for improving the accuracy and reliability of MPXV detection. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00216-023-04518-9.
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spelling pubmed-98622352023-01-23 Development of highly accurate digital PCR method and reference material for monkeypox virus detection Yang, Jiayi Guo, Ruohui Li, Huijie Chen, Guifang Lin, Yanmin Wang, Xia Niu, Chunyan Dong, Lianhua Anal Bioanal Chem Research Paper Human monkeypox has attracted attention recently. Monkeypox virus (MPXV) keeps evolving as it spreading around the world rapidly, which may threaten the health of more and more people. Here, we have developed a high order reference method based on digital PCR (dPCR) for MPXV detection, of which the limits of quantification (LoQ) and detection (LoD) are 38 and 6 copies/reaction, respectively. Pseudovirus reference materials (RM) containing the conserved F3L gene has been developed, and the homogeneity assessment showed that the RM was homogeneous. The reference value with its expanded uncertainty determined by the established dPCR is (2.74 ± 0.46) × 10(3) copies/μL. Six different MPXV test kits were accessed by the RM. Four out of six test kits cannot reach their claimed LoDs. The poor analytical sensitivity might cause false-negative results, which lead to incorrect diagnosis and treatment. The establishment of a high order reference method of dPCR and pseudovirus RM is very useful for improving the accuracy and reliability of MPXV detection. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00216-023-04518-9. Springer Berlin Heidelberg 2023-01-21 2023 /pmc/articles/PMC9862235/ /pubmed/36680591 http://dx.doi.org/10.1007/s00216-023-04518-9 Text en © Springer-Verlag GmbH Germany, part of Springer Nature 2023, Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Research Paper
Yang, Jiayi
Guo, Ruohui
Li, Huijie
Chen, Guifang
Lin, Yanmin
Wang, Xia
Niu, Chunyan
Dong, Lianhua
Development of highly accurate digital PCR method and reference material for monkeypox virus detection
title Development of highly accurate digital PCR method and reference material for monkeypox virus detection
title_full Development of highly accurate digital PCR method and reference material for monkeypox virus detection
title_fullStr Development of highly accurate digital PCR method and reference material for monkeypox virus detection
title_full_unstemmed Development of highly accurate digital PCR method and reference material for monkeypox virus detection
title_short Development of highly accurate digital PCR method and reference material for monkeypox virus detection
title_sort development of highly accurate digital pcr method and reference material for monkeypox virus detection
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9862235/
https://www.ncbi.nlm.nih.gov/pubmed/36680591
http://dx.doi.org/10.1007/s00216-023-04518-9
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