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In Silico Pan-Cancer Analysis Reveals Prognostic Role of the Erythroferrone (ERFE) Gene in Human Malignancies

The erythroferrone gene (ERFE), also termed CTRP15, belongs to the C1q tumor necrosis factor-related protein (CTRP) family. Despite multiple reports about the involvement of CTRPs in cancer, the role of ERFE in cancer progression is largely unknown. We previously found that ERFE was upregulated in e...

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Autores principales: Xu, Qingyu, Altrock, Eva, Schmitt, Nanni, Streuer, Alexander, Rapp, Felicitas, Nowak, Verena, Obländer, Julia, Weimer, Nadine, Palme, Iris, Göl, Melda, Hofmann, Wolf-Karsten, Nowak, Daniel, Riabov, Vladimir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9864255/
https://www.ncbi.nlm.nih.gov/pubmed/36675239
http://dx.doi.org/10.3390/ijms24021725
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author Xu, Qingyu
Altrock, Eva
Schmitt, Nanni
Streuer, Alexander
Rapp, Felicitas
Nowak, Verena
Obländer, Julia
Weimer, Nadine
Palme, Iris
Göl, Melda
Hofmann, Wolf-Karsten
Nowak, Daniel
Riabov, Vladimir
author_facet Xu, Qingyu
Altrock, Eva
Schmitt, Nanni
Streuer, Alexander
Rapp, Felicitas
Nowak, Verena
Obländer, Julia
Weimer, Nadine
Palme, Iris
Göl, Melda
Hofmann, Wolf-Karsten
Nowak, Daniel
Riabov, Vladimir
author_sort Xu, Qingyu
collection PubMed
description The erythroferrone gene (ERFE), also termed CTRP15, belongs to the C1q tumor necrosis factor-related protein (CTRP) family. Despite multiple reports about the involvement of CTRPs in cancer, the role of ERFE in cancer progression is largely unknown. We previously found that ERFE was upregulated in erythroid progenitors in myelodysplastic syndromes and strongly predicted overall survival. To understand the potential molecular interactions and identify cues for further functional investigation and the prognostic impact of ERFE in other malignancies, we performed a pan-cancer in silico analysis utilizing the Cancer Genome Atlas datasets. Our analysis shows that the ERFE mRNA is significantly overexpressed in 22 tumors and affects the prognosis in 11 cancer types. In certain tumors such as breast cancer and adrenocortical carcinoma, ERFE overexpression has been associated with the presence of oncogenic mutations and a higher tumor mutational burden. The expression of ERFE is co-regulated with the factors and pathways involved in cancer progression and metastasis, including activated pathways of the cell cycle, extracellular matrix/tumor microenvironment, G protein-coupled receptor, NOTCH, WNT, and PI3 kinase-AKT. Moreover, ERFE expression influences intratumoral immune cell infiltration. Conclusively, ERFE is aberrantly expressed in pan-cancer and can potentially function as a prognostic biomarker based on its putative functions during tumorigenesis and tumor development.
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spelling pubmed-98642552023-01-22 In Silico Pan-Cancer Analysis Reveals Prognostic Role of the Erythroferrone (ERFE) Gene in Human Malignancies Xu, Qingyu Altrock, Eva Schmitt, Nanni Streuer, Alexander Rapp, Felicitas Nowak, Verena Obländer, Julia Weimer, Nadine Palme, Iris Göl, Melda Hofmann, Wolf-Karsten Nowak, Daniel Riabov, Vladimir Int J Mol Sci Article The erythroferrone gene (ERFE), also termed CTRP15, belongs to the C1q tumor necrosis factor-related protein (CTRP) family. Despite multiple reports about the involvement of CTRPs in cancer, the role of ERFE in cancer progression is largely unknown. We previously found that ERFE was upregulated in erythroid progenitors in myelodysplastic syndromes and strongly predicted overall survival. To understand the potential molecular interactions and identify cues for further functional investigation and the prognostic impact of ERFE in other malignancies, we performed a pan-cancer in silico analysis utilizing the Cancer Genome Atlas datasets. Our analysis shows that the ERFE mRNA is significantly overexpressed in 22 tumors and affects the prognosis in 11 cancer types. In certain tumors such as breast cancer and adrenocortical carcinoma, ERFE overexpression has been associated with the presence of oncogenic mutations and a higher tumor mutational burden. The expression of ERFE is co-regulated with the factors and pathways involved in cancer progression and metastasis, including activated pathways of the cell cycle, extracellular matrix/tumor microenvironment, G protein-coupled receptor, NOTCH, WNT, and PI3 kinase-AKT. Moreover, ERFE expression influences intratumoral immune cell infiltration. Conclusively, ERFE is aberrantly expressed in pan-cancer and can potentially function as a prognostic biomarker based on its putative functions during tumorigenesis and tumor development. MDPI 2023-01-15 /pmc/articles/PMC9864255/ /pubmed/36675239 http://dx.doi.org/10.3390/ijms24021725 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Xu, Qingyu
Altrock, Eva
Schmitt, Nanni
Streuer, Alexander
Rapp, Felicitas
Nowak, Verena
Obländer, Julia
Weimer, Nadine
Palme, Iris
Göl, Melda
Hofmann, Wolf-Karsten
Nowak, Daniel
Riabov, Vladimir
In Silico Pan-Cancer Analysis Reveals Prognostic Role of the Erythroferrone (ERFE) Gene in Human Malignancies
title In Silico Pan-Cancer Analysis Reveals Prognostic Role of the Erythroferrone (ERFE) Gene in Human Malignancies
title_full In Silico Pan-Cancer Analysis Reveals Prognostic Role of the Erythroferrone (ERFE) Gene in Human Malignancies
title_fullStr In Silico Pan-Cancer Analysis Reveals Prognostic Role of the Erythroferrone (ERFE) Gene in Human Malignancies
title_full_unstemmed In Silico Pan-Cancer Analysis Reveals Prognostic Role of the Erythroferrone (ERFE) Gene in Human Malignancies
title_short In Silico Pan-Cancer Analysis Reveals Prognostic Role of the Erythroferrone (ERFE) Gene in Human Malignancies
title_sort in silico pan-cancer analysis reveals prognostic role of the erythroferrone (erfe) gene in human malignancies
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9864255/
https://www.ncbi.nlm.nih.gov/pubmed/36675239
http://dx.doi.org/10.3390/ijms24021725
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