Cargando…

Genome-Wide Identification and Analysis of the Maize Serine Peptidase S8 Family Genes in Response to Drought at Seedling Stage

Subtilisin-like proteases (subtilases) are found in almost all plant species and are involved in regulating various biotic and abiotic stresses. Although the literature on subtilases in different plant species is vast, the gene function of the serine peptidase S8 family and its maize subfamily is st...

Descripción completa

Detalles Bibliográficos
Autores principales: Cui, Hongwei, Zhou, Guyi, Ruan, Hongqiang, Zhao, Jun, Hasi, Agula, Zong, Na
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9865268/
https://www.ncbi.nlm.nih.gov/pubmed/36679082
http://dx.doi.org/10.3390/plants12020369
_version_ 1784875794814730240
author Cui, Hongwei
Zhou, Guyi
Ruan, Hongqiang
Zhao, Jun
Hasi, Agula
Zong, Na
author_facet Cui, Hongwei
Zhou, Guyi
Ruan, Hongqiang
Zhao, Jun
Hasi, Agula
Zong, Na
author_sort Cui, Hongwei
collection PubMed
description Subtilisin-like proteases (subtilases) are found in almost all plant species and are involved in regulating various biotic and abiotic stresses. Although the literature on subtilases in different plant species is vast, the gene function of the serine peptidase S8 family and its maize subfamily is still unknown. Here, a bioinformatics analysis of this gene family was conducted by describing gene structure, conserved motifs, phylogenetic relationships, chromosomal distributions, gene duplications, and promoter cis-elements. In total, we identified 18 ZmSPS8 genes in maize, distributed on 7 chromosomes, and half of them were hydrophilic. Most of these proteins were located at the cell wall and had similar secondary and tertiary structures. Prediction of cis-regulatory elements in promoters illustrated that they were mainly associated with hormones and abiotic stress. Maize inbred lines B73, Zheng58, and Qi319 were used to analyze the spatial-temporal expression patterns of ZmSPS8 genes under drought treatment. Seedling drought results showed that Qi319 had the highest percent survival after 14 d of withholding irrigation, while B73 was the lowest. Leaf relative water content (LRWC) declined more rapidly in B73 and to lower values, and the nitrotetrazolium blue chloride (NBT) contents of leaves were higher in Qi319 than in the other inbreds. The qPCR results indicated that 6 serine peptidase S8 family genes were positively or negatively correlated with plant tolerance to drought stress. Our study provides a detailed analysis of the ZmSPS8s in the maize genome and finds a link between drought tolerance and the family gene expression, which was established by using different maize inbred lines.
format Online
Article
Text
id pubmed-9865268
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-98652682023-01-22 Genome-Wide Identification and Analysis of the Maize Serine Peptidase S8 Family Genes in Response to Drought at Seedling Stage Cui, Hongwei Zhou, Guyi Ruan, Hongqiang Zhao, Jun Hasi, Agula Zong, Na Plants (Basel) Article Subtilisin-like proteases (subtilases) are found in almost all plant species and are involved in regulating various biotic and abiotic stresses. Although the literature on subtilases in different plant species is vast, the gene function of the serine peptidase S8 family and its maize subfamily is still unknown. Here, a bioinformatics analysis of this gene family was conducted by describing gene structure, conserved motifs, phylogenetic relationships, chromosomal distributions, gene duplications, and promoter cis-elements. In total, we identified 18 ZmSPS8 genes in maize, distributed on 7 chromosomes, and half of them were hydrophilic. Most of these proteins were located at the cell wall and had similar secondary and tertiary structures. Prediction of cis-regulatory elements in promoters illustrated that they were mainly associated with hormones and abiotic stress. Maize inbred lines B73, Zheng58, and Qi319 were used to analyze the spatial-temporal expression patterns of ZmSPS8 genes under drought treatment. Seedling drought results showed that Qi319 had the highest percent survival after 14 d of withholding irrigation, while B73 was the lowest. Leaf relative water content (LRWC) declined more rapidly in B73 and to lower values, and the nitrotetrazolium blue chloride (NBT) contents of leaves were higher in Qi319 than in the other inbreds. The qPCR results indicated that 6 serine peptidase S8 family genes were positively or negatively correlated with plant tolerance to drought stress. Our study provides a detailed analysis of the ZmSPS8s in the maize genome and finds a link between drought tolerance and the family gene expression, which was established by using different maize inbred lines. MDPI 2023-01-12 /pmc/articles/PMC9865268/ /pubmed/36679082 http://dx.doi.org/10.3390/plants12020369 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Cui, Hongwei
Zhou, Guyi
Ruan, Hongqiang
Zhao, Jun
Hasi, Agula
Zong, Na
Genome-Wide Identification and Analysis of the Maize Serine Peptidase S8 Family Genes in Response to Drought at Seedling Stage
title Genome-Wide Identification and Analysis of the Maize Serine Peptidase S8 Family Genes in Response to Drought at Seedling Stage
title_full Genome-Wide Identification and Analysis of the Maize Serine Peptidase S8 Family Genes in Response to Drought at Seedling Stage
title_fullStr Genome-Wide Identification and Analysis of the Maize Serine Peptidase S8 Family Genes in Response to Drought at Seedling Stage
title_full_unstemmed Genome-Wide Identification and Analysis of the Maize Serine Peptidase S8 Family Genes in Response to Drought at Seedling Stage
title_short Genome-Wide Identification and Analysis of the Maize Serine Peptidase S8 Family Genes in Response to Drought at Seedling Stage
title_sort genome-wide identification and analysis of the maize serine peptidase s8 family genes in response to drought at seedling stage
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9865268/
https://www.ncbi.nlm.nih.gov/pubmed/36679082
http://dx.doi.org/10.3390/plants12020369
work_keys_str_mv AT cuihongwei genomewideidentificationandanalysisofthemaizeserinepeptidases8familygenesinresponsetodroughtatseedlingstage
AT zhouguyi genomewideidentificationandanalysisofthemaizeserinepeptidases8familygenesinresponsetodroughtatseedlingstage
AT ruanhongqiang genomewideidentificationandanalysisofthemaizeserinepeptidases8familygenesinresponsetodroughtatseedlingstage
AT zhaojun genomewideidentificationandanalysisofthemaizeserinepeptidases8familygenesinresponsetodroughtatseedlingstage
AT hasiagula genomewideidentificationandanalysisofthemaizeserinepeptidases8familygenesinresponsetodroughtatseedlingstage
AT zongna genomewideidentificationandanalysisofthemaizeserinepeptidases8familygenesinresponsetodroughtatseedlingstage