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Feature Ranking by Variational Dropout for Classification Using Thermograms from Diabetic Foot Ulcers

Diabetes mellitus presents a high prevalence around the world. A common and long-term derived complication is diabetic foot ulcers (DFUs), which have a global prevalence of roughly 6.3%, and a lifetime incidence of up to 34%. Infrared thermograms, covering the entire plantar aspect of both feet, can...

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Autores principales: Hernandez-Guedes, Abian, Arteaga-Marrero, Natalia, Villa, Enrique, Callico, Gustavo M., Ruiz-Alzola, Juan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9867159/
https://www.ncbi.nlm.nih.gov/pubmed/36679552
http://dx.doi.org/10.3390/s23020757
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author Hernandez-Guedes, Abian
Arteaga-Marrero, Natalia
Villa, Enrique
Callico, Gustavo M.
Ruiz-Alzola, Juan
author_facet Hernandez-Guedes, Abian
Arteaga-Marrero, Natalia
Villa, Enrique
Callico, Gustavo M.
Ruiz-Alzola, Juan
author_sort Hernandez-Guedes, Abian
collection PubMed
description Diabetes mellitus presents a high prevalence around the world. A common and long-term derived complication is diabetic foot ulcers (DFUs), which have a global prevalence of roughly 6.3%, and a lifetime incidence of up to 34%. Infrared thermograms, covering the entire plantar aspect of both feet, can be employed to monitor the risk of developing a foot ulcer, because diabetic patients exhibit an abnormal pattern that may indicate a foot disorder. In this study, the publicly available INAOE dataset composed of thermogram images of healthy and diabetic subjects was employed to extract relevant features aiming to establish a set of state-of-the-art features that efficiently classify DFU. This database was extended and balanced by fusing it with private local thermograms from healthy volunteers and generating synthetic data via synthetic minority oversampling technique (SMOTE). State-of-the-art features were extracted using two classical approaches, LASSO and random forest, as well as two variational deep learning (DL)-based ones: concrete and variational dropout. Then, the most relevant features were detected and ranked. Subsequently, the extracted features were employed to classify subjects at risk of developing an ulcer using as reference a support vector machine (SVM) classifier with a fixed hyperparameter configuration to evaluate the robustness of the selected features. The new set of features extracted considerably differed from those currently considered state-of-the-art but provided a fair performance. Among the implemented extraction approaches, the variational DL ones, particularly the concrete dropout, performed the best, reporting an F1 score of 90% using the aforementioned SVM classifier. In comparison with features previously considered as the state-of-the-art, approximately 15% better performance was achieved for classification.
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spelling pubmed-98671592023-01-22 Feature Ranking by Variational Dropout for Classification Using Thermograms from Diabetic Foot Ulcers Hernandez-Guedes, Abian Arteaga-Marrero, Natalia Villa, Enrique Callico, Gustavo M. Ruiz-Alzola, Juan Sensors (Basel) Article Diabetes mellitus presents a high prevalence around the world. A common and long-term derived complication is diabetic foot ulcers (DFUs), which have a global prevalence of roughly 6.3%, and a lifetime incidence of up to 34%. Infrared thermograms, covering the entire plantar aspect of both feet, can be employed to monitor the risk of developing a foot ulcer, because diabetic patients exhibit an abnormal pattern that may indicate a foot disorder. In this study, the publicly available INAOE dataset composed of thermogram images of healthy and diabetic subjects was employed to extract relevant features aiming to establish a set of state-of-the-art features that efficiently classify DFU. This database was extended and balanced by fusing it with private local thermograms from healthy volunteers and generating synthetic data via synthetic minority oversampling technique (SMOTE). State-of-the-art features were extracted using two classical approaches, LASSO and random forest, as well as two variational deep learning (DL)-based ones: concrete and variational dropout. Then, the most relevant features were detected and ranked. Subsequently, the extracted features were employed to classify subjects at risk of developing an ulcer using as reference a support vector machine (SVM) classifier with a fixed hyperparameter configuration to evaluate the robustness of the selected features. The new set of features extracted considerably differed from those currently considered state-of-the-art but provided a fair performance. Among the implemented extraction approaches, the variational DL ones, particularly the concrete dropout, performed the best, reporting an F1 score of 90% using the aforementioned SVM classifier. In comparison with features previously considered as the state-of-the-art, approximately 15% better performance was achieved for classification. MDPI 2023-01-09 /pmc/articles/PMC9867159/ /pubmed/36679552 http://dx.doi.org/10.3390/s23020757 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Hernandez-Guedes, Abian
Arteaga-Marrero, Natalia
Villa, Enrique
Callico, Gustavo M.
Ruiz-Alzola, Juan
Feature Ranking by Variational Dropout for Classification Using Thermograms from Diabetic Foot Ulcers
title Feature Ranking by Variational Dropout for Classification Using Thermograms from Diabetic Foot Ulcers
title_full Feature Ranking by Variational Dropout for Classification Using Thermograms from Diabetic Foot Ulcers
title_fullStr Feature Ranking by Variational Dropout for Classification Using Thermograms from Diabetic Foot Ulcers
title_full_unstemmed Feature Ranking by Variational Dropout for Classification Using Thermograms from Diabetic Foot Ulcers
title_short Feature Ranking by Variational Dropout for Classification Using Thermograms from Diabetic Foot Ulcers
title_sort feature ranking by variational dropout for classification using thermograms from diabetic foot ulcers
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9867159/
https://www.ncbi.nlm.nih.gov/pubmed/36679552
http://dx.doi.org/10.3390/s23020757
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