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Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance

Early identification of pre-diabetes provides an opportunity for intervention and treatment to delay its progression to type 2 diabetes mellitus (T2DM). We aimed to identify the biomarkers of impaired glucose tolerance (IGT) through bioinformatics analysis. The GSE76896 dataset, including non-diabet...

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Autores principales: Chen, Qi, Li, Fangyu, Gao, Yuanyuan, Yang, Fengying, Yuan, Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9867186/
https://www.ncbi.nlm.nih.gov/pubmed/36675322
http://dx.doi.org/10.3390/ijms24021807
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author Chen, Qi
Li, Fangyu
Gao, Yuanyuan
Yang, Fengying
Yuan, Li
author_facet Chen, Qi
Li, Fangyu
Gao, Yuanyuan
Yang, Fengying
Yuan, Li
author_sort Chen, Qi
collection PubMed
description Early identification of pre-diabetes provides an opportunity for intervention and treatment to delay its progression to type 2 diabetes mellitus (T2DM). We aimed to identify the biomarkers of impaired glucose tolerance (IGT) through bioinformatics analysis. The GSE76896 dataset, including non-diabetic (ND), IGT, and T2DM clinical samples, was deeply analyzed to identify 309 Co-DEGs for IGT and T2DM. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses indicated that inflammatory responses and the PI3K-AKT signaling pathway are important patho-physiological features of IGT and T2DM. Protein–protein interaction (PPI) network analysis and cytoHubba technolgy identified seven hub genes: namely, CCL2, CXCL1, CXCL8, EDN1, FGF13, MMP1, and NGF. The expression and ROC curves of these hub genes were validated using the GSE38642 dataset. Through an immunofluorescence assay, we found that the expression of FGF13 in islets of mice in the HFD and T2DM groups was significantly lower than in the control group. Similarly, the level of FGF13 in the sera of IGT and T2DM patients was lower than that in the healthy group. Together, these results suggest that FGF13 can be treated as a novel biomarker of IGT, which may provide new targets for the diagnosis and treatment of pre-diabetes and T2DM.
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spelling pubmed-98671862023-01-22 Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance Chen, Qi Li, Fangyu Gao, Yuanyuan Yang, Fengying Yuan, Li Int J Mol Sci Article Early identification of pre-diabetes provides an opportunity for intervention and treatment to delay its progression to type 2 diabetes mellitus (T2DM). We aimed to identify the biomarkers of impaired glucose tolerance (IGT) through bioinformatics analysis. The GSE76896 dataset, including non-diabetic (ND), IGT, and T2DM clinical samples, was deeply analyzed to identify 309 Co-DEGs for IGT and T2DM. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses indicated that inflammatory responses and the PI3K-AKT signaling pathway are important patho-physiological features of IGT and T2DM. Protein–protein interaction (PPI) network analysis and cytoHubba technolgy identified seven hub genes: namely, CCL2, CXCL1, CXCL8, EDN1, FGF13, MMP1, and NGF. The expression and ROC curves of these hub genes were validated using the GSE38642 dataset. Through an immunofluorescence assay, we found that the expression of FGF13 in islets of mice in the HFD and T2DM groups was significantly lower than in the control group. Similarly, the level of FGF13 in the sera of IGT and T2DM patients was lower than that in the healthy group. Together, these results suggest that FGF13 can be treated as a novel biomarker of IGT, which may provide new targets for the diagnosis and treatment of pre-diabetes and T2DM. MDPI 2023-01-16 /pmc/articles/PMC9867186/ /pubmed/36675322 http://dx.doi.org/10.3390/ijms24021807 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Chen, Qi
Li, Fangyu
Gao, Yuanyuan
Yang, Fengying
Yuan, Li
Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance
title Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance
title_full Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance
title_fullStr Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance
title_full_unstemmed Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance
title_short Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance
title_sort identification of fgf13 as a potential biomarker and target for diagnosis of impaired glucose tolerance
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9867186/
https://www.ncbi.nlm.nih.gov/pubmed/36675322
http://dx.doi.org/10.3390/ijms24021807
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