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Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance
Early identification of pre-diabetes provides an opportunity for intervention and treatment to delay its progression to type 2 diabetes mellitus (T2DM). We aimed to identify the biomarkers of impaired glucose tolerance (IGT) through bioinformatics analysis. The GSE76896 dataset, including non-diabet...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9867186/ https://www.ncbi.nlm.nih.gov/pubmed/36675322 http://dx.doi.org/10.3390/ijms24021807 |
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author | Chen, Qi Li, Fangyu Gao, Yuanyuan Yang, Fengying Yuan, Li |
author_facet | Chen, Qi Li, Fangyu Gao, Yuanyuan Yang, Fengying Yuan, Li |
author_sort | Chen, Qi |
collection | PubMed |
description | Early identification of pre-diabetes provides an opportunity for intervention and treatment to delay its progression to type 2 diabetes mellitus (T2DM). We aimed to identify the biomarkers of impaired glucose tolerance (IGT) through bioinformatics analysis. The GSE76896 dataset, including non-diabetic (ND), IGT, and T2DM clinical samples, was deeply analyzed to identify 309 Co-DEGs for IGT and T2DM. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses indicated that inflammatory responses and the PI3K-AKT signaling pathway are important patho-physiological features of IGT and T2DM. Protein–protein interaction (PPI) network analysis and cytoHubba technolgy identified seven hub genes: namely, CCL2, CXCL1, CXCL8, EDN1, FGF13, MMP1, and NGF. The expression and ROC curves of these hub genes were validated using the GSE38642 dataset. Through an immunofluorescence assay, we found that the expression of FGF13 in islets of mice in the HFD and T2DM groups was significantly lower than in the control group. Similarly, the level of FGF13 in the sera of IGT and T2DM patients was lower than that in the healthy group. Together, these results suggest that FGF13 can be treated as a novel biomarker of IGT, which may provide new targets for the diagnosis and treatment of pre-diabetes and T2DM. |
format | Online Article Text |
id | pubmed-9867186 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-98671862023-01-22 Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance Chen, Qi Li, Fangyu Gao, Yuanyuan Yang, Fengying Yuan, Li Int J Mol Sci Article Early identification of pre-diabetes provides an opportunity for intervention and treatment to delay its progression to type 2 diabetes mellitus (T2DM). We aimed to identify the biomarkers of impaired glucose tolerance (IGT) through bioinformatics analysis. The GSE76896 dataset, including non-diabetic (ND), IGT, and T2DM clinical samples, was deeply analyzed to identify 309 Co-DEGs for IGT and T2DM. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses indicated that inflammatory responses and the PI3K-AKT signaling pathway are important patho-physiological features of IGT and T2DM. Protein–protein interaction (PPI) network analysis and cytoHubba technolgy identified seven hub genes: namely, CCL2, CXCL1, CXCL8, EDN1, FGF13, MMP1, and NGF. The expression and ROC curves of these hub genes were validated using the GSE38642 dataset. Through an immunofluorescence assay, we found that the expression of FGF13 in islets of mice in the HFD and T2DM groups was significantly lower than in the control group. Similarly, the level of FGF13 in the sera of IGT and T2DM patients was lower than that in the healthy group. Together, these results suggest that FGF13 can be treated as a novel biomarker of IGT, which may provide new targets for the diagnosis and treatment of pre-diabetes and T2DM. MDPI 2023-01-16 /pmc/articles/PMC9867186/ /pubmed/36675322 http://dx.doi.org/10.3390/ijms24021807 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Chen, Qi Li, Fangyu Gao, Yuanyuan Yang, Fengying Yuan, Li Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance |
title | Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance |
title_full | Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance |
title_fullStr | Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance |
title_full_unstemmed | Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance |
title_short | Identification of FGF13 as a Potential Biomarker and Target for Diagnosis of Impaired Glucose Tolerance |
title_sort | identification of fgf13 as a potential biomarker and target for diagnosis of impaired glucose tolerance |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9867186/ https://www.ncbi.nlm.nih.gov/pubmed/36675322 http://dx.doi.org/10.3390/ijms24021807 |
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