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Machine Learning approach for TWA detection relying on ensemble data design
BACKGROUND AND OBJECTIVE: T-wave alternans (TWA) is a fluctuation of the ST–T complex of the surface electrocardiogram (ECG) on an every–other–beat basis. It has been shown to be clinically helpful for sudden cardiac death stratification, though the lack of a gold standard to benchmark detection met...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9868537/ https://www.ncbi.nlm.nih.gov/pubmed/36699267 http://dx.doi.org/10.1016/j.heliyon.2023.e12947 |
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author | Fernández–Calvillo, Miriam Gutiérrez Goya–Esteban, Rebeca Cruz–Roldán, Fernando Hernández–Madrid, Antonio Blanco–Velasco, Manuel |
author_facet | Fernández–Calvillo, Miriam Gutiérrez Goya–Esteban, Rebeca Cruz–Roldán, Fernando Hernández–Madrid, Antonio Blanco–Velasco, Manuel |
author_sort | Fernández–Calvillo, Miriam Gutiérrez |
collection | PubMed |
description | BACKGROUND AND OBJECTIVE: T-wave alternans (TWA) is a fluctuation of the ST–T complex of the surface electrocardiogram (ECG) on an every–other–beat basis. It has been shown to be clinically helpful for sudden cardiac death stratification, though the lack of a gold standard to benchmark detection methods limits its application and impairs the development of alternative techniques. In this work, a novel approach based on machine learning for TWA detection is proposed. Additionally, a complete experimental setup is presented for TWA detection methods benchmarking. METHODS: The proposed experimental setup is based on the use of open-source databases to enable experiment replication and the use of real ECG signals with added TWA episodes. Also, intra-patient overfitting and class imbalance have been carefully avoided. The Spectral Method (SM), the Modified Moving Average Method (MMA), and the Time Domain Method (TM) are used to obtain input features to the Machine Learning (ML) algorithms, namely, K Nearest Neighbor, Decision Trees, Random Forest, Support Vector Machine and Multi-Layer Perceptron. RESULTS: There were not found large differences in the performance of the different ML algorithms. Decision Trees showed the best overall performance (accuracy [Formula: see text] , precision [Formula: see text] , Recall [Formula: see text] , F1 score [Formula: see text]). Compared to the SM (accuracy 0.79, precision 0.93, Recall 0.64, F1 score 0.76) there was an improvement in every metric except for the precision. CONCLUSIONS: In this work, a realistic database to test the presence of TWA using ML algorithms was assembled. The ML algorithms overall outperformed the SM used as a gold standard. Learning from data to identify alternans elicits a substantial detection growth at the expense of a small increment of the false alarm. |
format | Online Article Text |
id | pubmed-9868537 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-98685372023-01-24 Machine Learning approach for TWA detection relying on ensemble data design Fernández–Calvillo, Miriam Gutiérrez Goya–Esteban, Rebeca Cruz–Roldán, Fernando Hernández–Madrid, Antonio Blanco–Velasco, Manuel Heliyon Research Article BACKGROUND AND OBJECTIVE: T-wave alternans (TWA) is a fluctuation of the ST–T complex of the surface electrocardiogram (ECG) on an every–other–beat basis. It has been shown to be clinically helpful for sudden cardiac death stratification, though the lack of a gold standard to benchmark detection methods limits its application and impairs the development of alternative techniques. In this work, a novel approach based on machine learning for TWA detection is proposed. Additionally, a complete experimental setup is presented for TWA detection methods benchmarking. METHODS: The proposed experimental setup is based on the use of open-source databases to enable experiment replication and the use of real ECG signals with added TWA episodes. Also, intra-patient overfitting and class imbalance have been carefully avoided. The Spectral Method (SM), the Modified Moving Average Method (MMA), and the Time Domain Method (TM) are used to obtain input features to the Machine Learning (ML) algorithms, namely, K Nearest Neighbor, Decision Trees, Random Forest, Support Vector Machine and Multi-Layer Perceptron. RESULTS: There were not found large differences in the performance of the different ML algorithms. Decision Trees showed the best overall performance (accuracy [Formula: see text] , precision [Formula: see text] , Recall [Formula: see text] , F1 score [Formula: see text]). Compared to the SM (accuracy 0.79, precision 0.93, Recall 0.64, F1 score 0.76) there was an improvement in every metric except for the precision. CONCLUSIONS: In this work, a realistic database to test the presence of TWA using ML algorithms was assembled. The ML algorithms overall outperformed the SM used as a gold standard. Learning from data to identify alternans elicits a substantial detection growth at the expense of a small increment of the false alarm. Elsevier 2023-01-16 /pmc/articles/PMC9868537/ /pubmed/36699267 http://dx.doi.org/10.1016/j.heliyon.2023.e12947 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Fernández–Calvillo, Miriam Gutiérrez Goya–Esteban, Rebeca Cruz–Roldán, Fernando Hernández–Madrid, Antonio Blanco–Velasco, Manuel Machine Learning approach for TWA detection relying on ensemble data design |
title | Machine Learning approach for TWA detection relying on ensemble data design |
title_full | Machine Learning approach for TWA detection relying on ensemble data design |
title_fullStr | Machine Learning approach for TWA detection relying on ensemble data design |
title_full_unstemmed | Machine Learning approach for TWA detection relying on ensemble data design |
title_short | Machine Learning approach for TWA detection relying on ensemble data design |
title_sort | machine learning approach for twa detection relying on ensemble data design |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9868537/ https://www.ncbi.nlm.nih.gov/pubmed/36699267 http://dx.doi.org/10.1016/j.heliyon.2023.e12947 |
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