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A semi-supervised learning approach with consistency regularization for tumor histopathological images analysis

INTRODUCTION: Manual inspection of histopathological images is important in clinical cancer diagnosis. Pathologists implement pathological diagnosis and prognostic evaluation through the microscopic examination of histopathological slices. This entire process is time-consuming, laborious, and challe...

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Autores principales: Jiang, Yanyun, Sui, Xiaodan, Ding, Yanhui, Xiao, Wei, Zheng, Yuanjie, Zhang, Yongxin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9870542/
https://www.ncbi.nlm.nih.gov/pubmed/36698401
http://dx.doi.org/10.3389/fonc.2022.1044026
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author Jiang, Yanyun
Sui, Xiaodan
Ding, Yanhui
Xiao, Wei
Zheng, Yuanjie
Zhang, Yongxin
author_facet Jiang, Yanyun
Sui, Xiaodan
Ding, Yanhui
Xiao, Wei
Zheng, Yuanjie
Zhang, Yongxin
author_sort Jiang, Yanyun
collection PubMed
description INTRODUCTION: Manual inspection of histopathological images is important in clinical cancer diagnosis. Pathologists implement pathological diagnosis and prognostic evaluation through the microscopic examination of histopathological slices. This entire process is time-consuming, laborious, and challenging for pathologists. The modern use of whole-slide imaging, which scans histopathology slides to digital slices, and analysis using computer-aided diagnosis is an essential problem. METHODS: To solve the problem of difficult labeling of histopathological data, and improve the flexibility of histopathological analysis in clinical applications, we herein propose a semi-supervised learning algorithm coupled with consistency regularization strategy, called“Semi- supervised Histopathology Analysis Network”(Semi-His-Net), for automated normal-versus-tumor and subtype classifications. Specifically, when inputted disturbing versions of the same image, the model should predict similar outputs. Based on this, the model itself can assign artificial labels to unlabeled data for subsequent model training, thereby effectively reducing the labeled data required for training. RESULTS: Our Semi-His-Net is able to classify patches from breast cancer histopathological images into normal tissue and three other different tumor subtypes, achieving an accuracy was 90%. The average AUC of cross-classification between tumors reached 0.893. DISCUSSION: To overcome the limitations of visual inspection by pathologists for histopathology images, such as long time and low repeatability, we have developed a deep learning-based framework (Semi-His-Net) for automatic classification subdivision of the subtypes contained in the whole pathological images. This learning-based framework has great potential to improve the efficiency and repeatability of histopathological image diagnosis.
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spelling pubmed-98705422023-01-24 A semi-supervised learning approach with consistency regularization for tumor histopathological images analysis Jiang, Yanyun Sui, Xiaodan Ding, Yanhui Xiao, Wei Zheng, Yuanjie Zhang, Yongxin Front Oncol Oncology INTRODUCTION: Manual inspection of histopathological images is important in clinical cancer diagnosis. Pathologists implement pathological diagnosis and prognostic evaluation through the microscopic examination of histopathological slices. This entire process is time-consuming, laborious, and challenging for pathologists. The modern use of whole-slide imaging, which scans histopathology slides to digital slices, and analysis using computer-aided diagnosis is an essential problem. METHODS: To solve the problem of difficult labeling of histopathological data, and improve the flexibility of histopathological analysis in clinical applications, we herein propose a semi-supervised learning algorithm coupled with consistency regularization strategy, called“Semi- supervised Histopathology Analysis Network”(Semi-His-Net), for automated normal-versus-tumor and subtype classifications. Specifically, when inputted disturbing versions of the same image, the model should predict similar outputs. Based on this, the model itself can assign artificial labels to unlabeled data for subsequent model training, thereby effectively reducing the labeled data required for training. RESULTS: Our Semi-His-Net is able to classify patches from breast cancer histopathological images into normal tissue and three other different tumor subtypes, achieving an accuracy was 90%. The average AUC of cross-classification between tumors reached 0.893. DISCUSSION: To overcome the limitations of visual inspection by pathologists for histopathology images, such as long time and low repeatability, we have developed a deep learning-based framework (Semi-His-Net) for automatic classification subdivision of the subtypes contained in the whole pathological images. This learning-based framework has great potential to improve the efficiency and repeatability of histopathological image diagnosis. Frontiers Media S.A. 2023-01-09 /pmc/articles/PMC9870542/ /pubmed/36698401 http://dx.doi.org/10.3389/fonc.2022.1044026 Text en Copyright © 2023 Jiang, Sui, Ding, Xiao, Zheng and Zhang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Jiang, Yanyun
Sui, Xiaodan
Ding, Yanhui
Xiao, Wei
Zheng, Yuanjie
Zhang, Yongxin
A semi-supervised learning approach with consistency regularization for tumor histopathological images analysis
title A semi-supervised learning approach with consistency regularization for tumor histopathological images analysis
title_full A semi-supervised learning approach with consistency regularization for tumor histopathological images analysis
title_fullStr A semi-supervised learning approach with consistency regularization for tumor histopathological images analysis
title_full_unstemmed A semi-supervised learning approach with consistency regularization for tumor histopathological images analysis
title_short A semi-supervised learning approach with consistency regularization for tumor histopathological images analysis
title_sort semi-supervised learning approach with consistency regularization for tumor histopathological images analysis
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9870542/
https://www.ncbi.nlm.nih.gov/pubmed/36698401
http://dx.doi.org/10.3389/fonc.2022.1044026
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