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Generalizable transfer learning of automated tumor segmentation from cervical cancers toward a universal model for uterine malignancies in diffusion-weighted MRI
PURPOSE: To investigate the generalizability of transfer learning (TL) of automated tumor segmentation from cervical cancers toward a universal model for cervical and uterine malignancies in diffusion-weighted magnetic resonance imaging (DWI). METHODS: In this retrospective multicenter study, we ana...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Vienna
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9871146/ https://www.ncbi.nlm.nih.gov/pubmed/36690870 http://dx.doi.org/10.1186/s13244-022-01356-8 |
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author | Lin, Yu-Chun Lin, Yenpo Huang, Yen-Ling Ho, Chih-Yi Chiang, Hsin-Ju Lu, Hsin-Ying Wang, Chun-Chieh Wang, Jiun-Jie Ng, Shu-Hang Lai, Chyong-Huey Lin, Gigin |
author_facet | Lin, Yu-Chun Lin, Yenpo Huang, Yen-Ling Ho, Chih-Yi Chiang, Hsin-Ju Lu, Hsin-Ying Wang, Chun-Chieh Wang, Jiun-Jie Ng, Shu-Hang Lai, Chyong-Huey Lin, Gigin |
author_sort | Lin, Yu-Chun |
collection | PubMed |
description | PURPOSE: To investigate the generalizability of transfer learning (TL) of automated tumor segmentation from cervical cancers toward a universal model for cervical and uterine malignancies in diffusion-weighted magnetic resonance imaging (DWI). METHODS: In this retrospective multicenter study, we analyzed pelvic DWI data from 169 and 320 patients with cervical and uterine malignancies and divided them into the training (144 and 256) and testing (25 and 64) datasets, respectively. A pretrained model was established using DeepLab V3 + from the cervical cancer dataset, followed by TL experiments adjusting the training data sizes and fine-tuning layers. The model performance was evaluated using the dice similarity coefficient (DSC). RESULTS: In predicting tumor segmentation for all cervical and uterine malignancies, TL models improved the DSCs from the pretrained cervical model (DSC 0.43) when adding 5, 13, 26, and 51 uterine cases for training (DSC improved from 0.57, 0.62, 0.68, 0.70, p < 0.001). Following the crossover at adding 128 cases (DSC 0.71), the model trained by combining data from adding all the 256 patients exhibited the highest DSCs for the combined cervical and uterine datasets (DSC 0.81) and cervical only dataset (DSC 0.91). CONCLUSIONS: TL may improve the generalizability of automated tumor segmentation of DWI from a specific cancer type toward multiple types of uterine malignancies especially in limited case numbers. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13244-022-01356-8. |
format | Online Article Text |
id | pubmed-9871146 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer Vienna |
record_format | MEDLINE/PubMed |
spelling | pubmed-98711462023-01-25 Generalizable transfer learning of automated tumor segmentation from cervical cancers toward a universal model for uterine malignancies in diffusion-weighted MRI Lin, Yu-Chun Lin, Yenpo Huang, Yen-Ling Ho, Chih-Yi Chiang, Hsin-Ju Lu, Hsin-Ying Wang, Chun-Chieh Wang, Jiun-Jie Ng, Shu-Hang Lai, Chyong-Huey Lin, Gigin Insights Imaging Original Article PURPOSE: To investigate the generalizability of transfer learning (TL) of automated tumor segmentation from cervical cancers toward a universal model for cervical and uterine malignancies in diffusion-weighted magnetic resonance imaging (DWI). METHODS: In this retrospective multicenter study, we analyzed pelvic DWI data from 169 and 320 patients with cervical and uterine malignancies and divided them into the training (144 and 256) and testing (25 and 64) datasets, respectively. A pretrained model was established using DeepLab V3 + from the cervical cancer dataset, followed by TL experiments adjusting the training data sizes and fine-tuning layers. The model performance was evaluated using the dice similarity coefficient (DSC). RESULTS: In predicting tumor segmentation for all cervical and uterine malignancies, TL models improved the DSCs from the pretrained cervical model (DSC 0.43) when adding 5, 13, 26, and 51 uterine cases for training (DSC improved from 0.57, 0.62, 0.68, 0.70, p < 0.001). Following the crossover at adding 128 cases (DSC 0.71), the model trained by combining data from adding all the 256 patients exhibited the highest DSCs for the combined cervical and uterine datasets (DSC 0.81) and cervical only dataset (DSC 0.91). CONCLUSIONS: TL may improve the generalizability of automated tumor segmentation of DWI from a specific cancer type toward multiple types of uterine malignancies especially in limited case numbers. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13244-022-01356-8. Springer Vienna 2023-01-24 /pmc/articles/PMC9871146/ /pubmed/36690870 http://dx.doi.org/10.1186/s13244-022-01356-8 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Article Lin, Yu-Chun Lin, Yenpo Huang, Yen-Ling Ho, Chih-Yi Chiang, Hsin-Ju Lu, Hsin-Ying Wang, Chun-Chieh Wang, Jiun-Jie Ng, Shu-Hang Lai, Chyong-Huey Lin, Gigin Generalizable transfer learning of automated tumor segmentation from cervical cancers toward a universal model for uterine malignancies in diffusion-weighted MRI |
title | Generalizable transfer learning of automated tumor segmentation from cervical cancers toward a universal model for uterine malignancies in diffusion-weighted MRI |
title_full | Generalizable transfer learning of automated tumor segmentation from cervical cancers toward a universal model for uterine malignancies in diffusion-weighted MRI |
title_fullStr | Generalizable transfer learning of automated tumor segmentation from cervical cancers toward a universal model for uterine malignancies in diffusion-weighted MRI |
title_full_unstemmed | Generalizable transfer learning of automated tumor segmentation from cervical cancers toward a universal model for uterine malignancies in diffusion-weighted MRI |
title_short | Generalizable transfer learning of automated tumor segmentation from cervical cancers toward a universal model for uterine malignancies in diffusion-weighted MRI |
title_sort | generalizable transfer learning of automated tumor segmentation from cervical cancers toward a universal model for uterine malignancies in diffusion-weighted mri |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9871146/ https://www.ncbi.nlm.nih.gov/pubmed/36690870 http://dx.doi.org/10.1186/s13244-022-01356-8 |
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