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The gene signature of tertiary lymphoid structures within ovarian cancer predicts the prognosis and immunotherapy benefit

Ovarian cancer (OC) has the lowest survival rate among gynecologic malignancies. Ectopic lymphocyte aggregates, namely tertiary lymphoid structures (TLSs), have been reported as positive biomarkers for tumor prognosis. However, the related gene signature of tertiary lymphoid structure in ovarian can...

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Autores principales: Hou, Yue, Qiao, Sijing, Li, Miao, Han, Xue, Wei, Xuan, Pang, Yingxin, Mao, Hongluan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9871364/
https://www.ncbi.nlm.nih.gov/pubmed/36704336
http://dx.doi.org/10.3389/fgene.2022.1090640
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author Hou, Yue
Qiao, Sijing
Li, Miao
Han, Xue
Wei, Xuan
Pang, Yingxin
Mao, Hongluan
author_facet Hou, Yue
Qiao, Sijing
Li, Miao
Han, Xue
Wei, Xuan
Pang, Yingxin
Mao, Hongluan
author_sort Hou, Yue
collection PubMed
description Ovarian cancer (OC) has the lowest survival rate among gynecologic malignancies. Ectopic lymphocyte aggregates, namely tertiary lymphoid structures (TLSs), have been reported as positive biomarkers for tumor prognosis. However, the related gene signature of tertiary lymphoid structure in ovarian cancer was less understood. Therefore, this study first exhibited the organizational patterns of tertiary lymphoid structure by H&E staining and immunohistochemistry (IHC), and confirmed the improved survival values of tertiary lymphoid structure and quantified tumor-infiltrating lymphocytes (CD20(+) B cells and CD8(+) T cells) in ovarian cancer patients. Secondly, we collected the genes involved in tertiary lymphoid structure from databases. By the univariate regression analysis, the tertiary lymphoid structure gene signature (CETP, CCR7, SELL, LAMP3, CCL19, CXCL9, CXCL10, CXCL11, and CXCL13) with prognostic value, characteristically of ovarian cancer, was constructed in the TCGA dataset and validated in the GSE140082 dataset. Thirdly, by performing CIBERSORT and Tumor Immune Dysfunction and Exclusion (TIDE) analysis, we found that the high expression of this gene signature was positively correlated with developed immune infiltration and reduced immune escape. The improved IPS score and application in the IMvigor210 dataset received PD-L1 proved the predictive value of immunotherapy for this gene signature. Furthermore, this signature showed a better correlation between tumor mutation burden and classical checkpoint genes. In conclusion, Tertiary lymphoid structure plays important role in tumor immunity and the gene signature can be evaluated as a biomarker for predicting prognosis and guiding immunotherapy in ovarian cancer.
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spelling pubmed-98713642023-01-25 The gene signature of tertiary lymphoid structures within ovarian cancer predicts the prognosis and immunotherapy benefit Hou, Yue Qiao, Sijing Li, Miao Han, Xue Wei, Xuan Pang, Yingxin Mao, Hongluan Front Genet Genetics Ovarian cancer (OC) has the lowest survival rate among gynecologic malignancies. Ectopic lymphocyte aggregates, namely tertiary lymphoid structures (TLSs), have been reported as positive biomarkers for tumor prognosis. However, the related gene signature of tertiary lymphoid structure in ovarian cancer was less understood. Therefore, this study first exhibited the organizational patterns of tertiary lymphoid structure by H&E staining and immunohistochemistry (IHC), and confirmed the improved survival values of tertiary lymphoid structure and quantified tumor-infiltrating lymphocytes (CD20(+) B cells and CD8(+) T cells) in ovarian cancer patients. Secondly, we collected the genes involved in tertiary lymphoid structure from databases. By the univariate regression analysis, the tertiary lymphoid structure gene signature (CETP, CCR7, SELL, LAMP3, CCL19, CXCL9, CXCL10, CXCL11, and CXCL13) with prognostic value, characteristically of ovarian cancer, was constructed in the TCGA dataset and validated in the GSE140082 dataset. Thirdly, by performing CIBERSORT and Tumor Immune Dysfunction and Exclusion (TIDE) analysis, we found that the high expression of this gene signature was positively correlated with developed immune infiltration and reduced immune escape. The improved IPS score and application in the IMvigor210 dataset received PD-L1 proved the predictive value of immunotherapy for this gene signature. Furthermore, this signature showed a better correlation between tumor mutation burden and classical checkpoint genes. In conclusion, Tertiary lymphoid structure plays important role in tumor immunity and the gene signature can be evaluated as a biomarker for predicting prognosis and guiding immunotherapy in ovarian cancer. Frontiers Media S.A. 2023-01-10 /pmc/articles/PMC9871364/ /pubmed/36704336 http://dx.doi.org/10.3389/fgene.2022.1090640 Text en Copyright © 2023 Hou, Qiao, Li, Han, Wei, Pang and Mao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Hou, Yue
Qiao, Sijing
Li, Miao
Han, Xue
Wei, Xuan
Pang, Yingxin
Mao, Hongluan
The gene signature of tertiary lymphoid structures within ovarian cancer predicts the prognosis and immunotherapy benefit
title The gene signature of tertiary lymphoid structures within ovarian cancer predicts the prognosis and immunotherapy benefit
title_full The gene signature of tertiary lymphoid structures within ovarian cancer predicts the prognosis and immunotherapy benefit
title_fullStr The gene signature of tertiary lymphoid structures within ovarian cancer predicts the prognosis and immunotherapy benefit
title_full_unstemmed The gene signature of tertiary lymphoid structures within ovarian cancer predicts the prognosis and immunotherapy benefit
title_short The gene signature of tertiary lymphoid structures within ovarian cancer predicts the prognosis and immunotherapy benefit
title_sort gene signature of tertiary lymphoid structures within ovarian cancer predicts the prognosis and immunotherapy benefit
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9871364/
https://www.ncbi.nlm.nih.gov/pubmed/36704336
http://dx.doi.org/10.3389/fgene.2022.1090640
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