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Comprehensive analysis of alfa defensin expression and prognosis in human colorectal cancer
INTRODUCTION: Colorectal cancer (CRC) is a serious threat to human health. Screening new biomarkers can provide basis for improving the prognosis and individualized treatment of CRC. Although some members of the defensin family were found increased in pancreatic cancer and CRC, their exact function...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9872005/ https://www.ncbi.nlm.nih.gov/pubmed/36703795 http://dx.doi.org/10.3389/fonc.2022.974654 |
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author | Zhao, Xinliang Lu, Mengnan Liu, Zhigang Zhang, Mingming Yuan, Hongmei Dan, Zhaoqiang Wang, Daihua Ma, Bingbing Yang, Yanqi Yang, Funing Sun, Ruifang Li, Lin Dang, Chengxue |
author_facet | Zhao, Xinliang Lu, Mengnan Liu, Zhigang Zhang, Mingming Yuan, Hongmei Dan, Zhaoqiang Wang, Daihua Ma, Bingbing Yang, Yanqi Yang, Funing Sun, Ruifang Li, Lin Dang, Chengxue |
author_sort | Zhao, Xinliang |
collection | PubMed |
description | INTRODUCTION: Colorectal cancer (CRC) is a serious threat to human health. Screening new biomarkers can provide basis for improving the prognosis and individualized treatment of CRC. Although some members of the defensin family were found increased in pancreatic cancer and CRC, their exact function and clinical significance remain unclear. METHODS: In this study, the expression, correlation, mutation, and functional enrichment of several defensin family members in pancreatic cancer and CRC were analyzed using tumor public databases and verified in several patients. RESULTS: Results showed no significant correlation between the expression levels of DEFA1-4 and CRC. The expression levels of DEFA5 and DEFA6 significantly increased in CRC tissues compared with those in normal tissues. DEFA5 may be associated with better prognosis of CRC, while DEFA6 may be associated with poor prognosis. Immunohistochemistry (IHC) experiments showed that the expression of DEFA6 was significantly higher in adenoma than in normal mucosa and slightly higher in carcinoma than in normal mucosa. The Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis found that DEFAs were closely related to hsa05202: transcriptional misregulation in cancer and Hsa04015: Rap1 signaling pathway. DEFA5 may be a stable and good prognostic marker, and DEFA6 may be a poor prognostic marker in CRC of metastasis. CONCLUSION: Overall, DEFA5 and DEFA6 have a certain degree of sensitivity and specificity in predicting CRC. |
format | Online Article Text |
id | pubmed-9872005 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-98720052023-01-25 Comprehensive analysis of alfa defensin expression and prognosis in human colorectal cancer Zhao, Xinliang Lu, Mengnan Liu, Zhigang Zhang, Mingming Yuan, Hongmei Dan, Zhaoqiang Wang, Daihua Ma, Bingbing Yang, Yanqi Yang, Funing Sun, Ruifang Li, Lin Dang, Chengxue Front Oncol Oncology INTRODUCTION: Colorectal cancer (CRC) is a serious threat to human health. Screening new biomarkers can provide basis for improving the prognosis and individualized treatment of CRC. Although some members of the defensin family were found increased in pancreatic cancer and CRC, their exact function and clinical significance remain unclear. METHODS: In this study, the expression, correlation, mutation, and functional enrichment of several defensin family members in pancreatic cancer and CRC were analyzed using tumor public databases and verified in several patients. RESULTS: Results showed no significant correlation between the expression levels of DEFA1-4 and CRC. The expression levels of DEFA5 and DEFA6 significantly increased in CRC tissues compared with those in normal tissues. DEFA5 may be associated with better prognosis of CRC, while DEFA6 may be associated with poor prognosis. Immunohistochemistry (IHC) experiments showed that the expression of DEFA6 was significantly higher in adenoma than in normal mucosa and slightly higher in carcinoma than in normal mucosa. The Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis found that DEFAs were closely related to hsa05202: transcriptional misregulation in cancer and Hsa04015: Rap1 signaling pathway. DEFA5 may be a stable and good prognostic marker, and DEFA6 may be a poor prognostic marker in CRC of metastasis. CONCLUSION: Overall, DEFA5 and DEFA6 have a certain degree of sensitivity and specificity in predicting CRC. Frontiers Media S.A. 2023-01-10 /pmc/articles/PMC9872005/ /pubmed/36703795 http://dx.doi.org/10.3389/fonc.2022.974654 Text en Copyright © 2023 Zhao, Lu, Liu, Zhang, Yuan, Dan, Wang, Ma, Yang, Yang, Sun, Li and Dang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Zhao, Xinliang Lu, Mengnan Liu, Zhigang Zhang, Mingming Yuan, Hongmei Dan, Zhaoqiang Wang, Daihua Ma, Bingbing Yang, Yanqi Yang, Funing Sun, Ruifang Li, Lin Dang, Chengxue Comprehensive analysis of alfa defensin expression and prognosis in human colorectal cancer |
title | Comprehensive analysis of alfa defensin expression and prognosis in human colorectal cancer |
title_full | Comprehensive analysis of alfa defensin expression and prognosis in human colorectal cancer |
title_fullStr | Comprehensive analysis of alfa defensin expression and prognosis in human colorectal cancer |
title_full_unstemmed | Comprehensive analysis of alfa defensin expression and prognosis in human colorectal cancer |
title_short | Comprehensive analysis of alfa defensin expression and prognosis in human colorectal cancer |
title_sort | comprehensive analysis of alfa defensin expression and prognosis in human colorectal cancer |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9872005/ https://www.ncbi.nlm.nih.gov/pubmed/36703795 http://dx.doi.org/10.3389/fonc.2022.974654 |
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