Complete Genome Sequence of a Cognatishimia activa Strain Assembled from the Phycosphere of the Marine Diatom Skeletonema tropicum

Cognatishimia activa, previously known as Thalassobius activus, has been frequently isolated from marine environments. Here, we present the complete genome sequence of C. activa strain SOCE 004, assembled from the phycosphere of a long-term laboratory-maintained culture of the diatom Skeletonema tro...

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Autores principales: Guo, Kangli, Xu, ShuaiShuai, Liu, Yuanhao, Chen, Zhuo, Hou, Shengwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2023
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9872673/
https://www.ncbi.nlm.nih.gov/pubmed/36598233
http://dx.doi.org/10.1128/mra.01164-22
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author Guo, Kangli
Xu, ShuaiShuai
Liu, Yuanhao
Chen, Zhuo
Hou, Shengwei
author_facet Guo, Kangli
Xu, ShuaiShuai
Liu, Yuanhao
Chen, Zhuo
Hou, Shengwei
author_sort Guo, Kangli
collection PubMed
description Cognatishimia activa, previously known as Thalassobius activus, has been frequently isolated from marine environments. Here, we present the complete genome sequence of C. activa strain SOCE 004, assembled from the phycosphere of a long-term laboratory-maintained culture of the diatom Skeletonema tropicum. The complete genome is 3,211,994 bp long, with an average G+C content of 53.69%. The genome contains 3,195 genes, including 3,133 protein-coding genes, 50 tRNAs, and 3 copies each of 5S, 16S, and 23S rRNA genes.
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spelling pubmed-98726732023-01-25 Complete Genome Sequence of a Cognatishimia activa Strain Assembled from the Phycosphere of the Marine Diatom Skeletonema tropicum Guo, Kangli Xu, ShuaiShuai Liu, Yuanhao Chen, Zhuo Hou, Shengwei Microbiol Resour Announc Genome Sequences Cognatishimia activa, previously known as Thalassobius activus, has been frequently isolated from marine environments. Here, we present the complete genome sequence of C. activa strain SOCE 004, assembled from the phycosphere of a long-term laboratory-maintained culture of the diatom Skeletonema tropicum. The complete genome is 3,211,994 bp long, with an average G+C content of 53.69%. The genome contains 3,195 genes, including 3,133 protein-coding genes, 50 tRNAs, and 3 copies each of 5S, 16S, and 23S rRNA genes. American Society for Microbiology 2023-01-04 /pmc/articles/PMC9872673/ /pubmed/36598233 http://dx.doi.org/10.1128/mra.01164-22 Text en Copyright © 2023 Guo et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Guo, Kangli
Xu, ShuaiShuai
Liu, Yuanhao
Chen, Zhuo
Hou, Shengwei
Complete Genome Sequence of a Cognatishimia activa Strain Assembled from the Phycosphere of the Marine Diatom Skeletonema tropicum
title Complete Genome Sequence of a Cognatishimia activa Strain Assembled from the Phycosphere of the Marine Diatom Skeletonema tropicum
title_full Complete Genome Sequence of a Cognatishimia activa Strain Assembled from the Phycosphere of the Marine Diatom Skeletonema tropicum
title_fullStr Complete Genome Sequence of a Cognatishimia activa Strain Assembled from the Phycosphere of the Marine Diatom Skeletonema tropicum
title_full_unstemmed Complete Genome Sequence of a Cognatishimia activa Strain Assembled from the Phycosphere of the Marine Diatom Skeletonema tropicum
title_short Complete Genome Sequence of a Cognatishimia activa Strain Assembled from the Phycosphere of the Marine Diatom Skeletonema tropicum
title_sort complete genome sequence of a cognatishimia activa strain assembled from the phycosphere of the marine diatom skeletonema tropicum
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9872673/
https://www.ncbi.nlm.nih.gov/pubmed/36598233
http://dx.doi.org/10.1128/mra.01164-22
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