CRUISE, a Tool for the Detection of Iterons in Circular Rep-Encoding Single-Stranded DNA Viruses

Iterons are short, repeated DNA sequences that are important for the replication of circular single-stranded DNA viruses. No tools that can reliably predict iterons are currently available. The CRUcivirus Iteron SEarch (CRUISE) tool is a computational tool that identifies iteron candidates near stem...

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Detalles Bibliográficos
Autores principales: Jones, Adam, Kasun, George W., Stover, Joel, Stedman, Kenneth M., de la Higuera, Ignacio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2022
Materias:
Databases and Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9872696/
https://www.ncbi.nlm.nih.gov/pubmed/36453926
http://dx.doi.org/10.1128/mra.01123-22
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author Jones, Adam
Kasun, George W.
Stover, Joel
Stedman, Kenneth M.
de la Higuera, Ignacio
author_facet Jones, Adam
Kasun, George W.
Stover, Joel
Stedman, Kenneth M.
de la Higuera, Ignacio
author_sort Jones, Adam
collection PubMed
description Iterons are short, repeated DNA sequences that are important for the replication of circular single-stranded DNA viruses. No tools that can reliably predict iterons are currently available. The CRUcivirus Iteron SEarch (CRUISE) tool is a computational tool that identifies iteron candidates near stem-loop structures in viral genomes.
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spelling pubmed-98726962023-01-25 CRUISE, a Tool for the Detection of Iterons in Circular Rep-Encoding Single-Stranded DNA Viruses Jones, Adam Kasun, George W. Stover, Joel Stedman, Kenneth M. de la Higuera, Ignacio Microbiol Resour Announc Databases and Software Iterons are short, repeated DNA sequences that are important for the replication of circular single-stranded DNA viruses. No tools that can reliably predict iterons are currently available. The CRUcivirus Iteron SEarch (CRUISE) tool is a computational tool that identifies iteron candidates near stem-loop structures in viral genomes. American Society for Microbiology 2022-12-01 /pmc/articles/PMC9872696/ /pubmed/36453926 http://dx.doi.org/10.1128/mra.01123-22 Text en Copyright © 2022 Jones et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Databases and Software
Jones, Adam
Kasun, George W.
Stover, Joel
Stedman, Kenneth M.
de la Higuera, Ignacio
CRUISE, a Tool for the Detection of Iterons in Circular Rep-Encoding Single-Stranded DNA Viruses
title CRUISE, a Tool for the Detection of Iterons in Circular Rep-Encoding Single-Stranded DNA Viruses
title_full CRUISE, a Tool for the Detection of Iterons in Circular Rep-Encoding Single-Stranded DNA Viruses
title_fullStr CRUISE, a Tool for the Detection of Iterons in Circular Rep-Encoding Single-Stranded DNA Viruses
title_full_unstemmed CRUISE, a Tool for the Detection of Iterons in Circular Rep-Encoding Single-Stranded DNA Viruses
title_short CRUISE, a Tool for the Detection of Iterons in Circular Rep-Encoding Single-Stranded DNA Viruses
title_sort cruise, a tool for the detection of iterons in circular rep-encoding single-stranded dna viruses
topic Databases and Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9872696/
https://www.ncbi.nlm.nih.gov/pubmed/36453926
http://dx.doi.org/10.1128/mra.01123-22
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