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Circulating Tumor DNA–Based Genotyping and Monitoring for Predicting Disease Relapses of Patients with Peripheral T-Cell Lymphomas

PURPOSE: Plasma circulating tumor DNA (ctDNA) could reflect the genetic alterations present in tumor tissues. However, there is little information about the clinical relevance of cell-free DNA genotyping in peripheral T-cell lymphoma (PTCL). MATERIALS AND METHODS: After targeted sequencing plasma ce...

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Autores principales: Kim, Seok Jin, Kim, Yeon Jeong, Yoon, Sang Eun, Ryu, Kyung Ju, Park, Bon, Park, Donghyun, Cho, Duck, Kim, Hyun-Young, Cho, Junhun, Ko, Young Hyeh, Park, Woong-Yang, Kim, Won Seog
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Cancer Association 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9873338/
https://www.ncbi.nlm.nih.gov/pubmed/35240014
http://dx.doi.org/10.4143/crt.2022.017
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author Kim, Seok Jin
Kim, Yeon Jeong
Yoon, Sang Eun
Ryu, Kyung Ju
Park, Bon
Park, Donghyun
Cho, Duck
Kim, Hyun-Young
Cho, Junhun
Ko, Young Hyeh
Park, Woong-Yang
Kim, Won Seog
author_facet Kim, Seok Jin
Kim, Yeon Jeong
Yoon, Sang Eun
Ryu, Kyung Ju
Park, Bon
Park, Donghyun
Cho, Duck
Kim, Hyun-Young
Cho, Junhun
Ko, Young Hyeh
Park, Woong-Yang
Kim, Won Seog
author_sort Kim, Seok Jin
collection PubMed
description PURPOSE: Plasma circulating tumor DNA (ctDNA) could reflect the genetic alterations present in tumor tissues. However, there is little information about the clinical relevance of cell-free DNA genotyping in peripheral T-cell lymphoma (PTCL). MATERIALS AND METHODS: After targeted sequencing plasma cell-free DNA of patients with various subtypes of PTCL (n=94), we analyzed the mutation profiles of plasma ctDNA samples and their predictive value of dynamic ctDNA monitoring for treatment outcomes. RESULTS: Plasma ctDNA mutations were detected in 53 patients (56%, 53/94), and the detection rate of somatic mutations was highest in angioimmunoblastic T-cell lymphoma (24/31, 77%) and PTCL, not otherwise specified (18/29, 62.1%). Somatic mutations were detected in 51 of 66 genes that were sequenced, including the following top 10 ranked genes: RHOA, CREBBP, KMT2D, TP53, IDH2, ALK, MEF2B, SOCS1, CARD11, and KRAS. In the longitudinal assessment of ctDNA mutation, the difference in ctDNA mutation volume after treatment showed a significant correlation with disease relapse or progression. Thus, a ≥ 1.5-log decrease in genome equivalent (GE) between baseline and the end of treatment showed a significant association with better survival outcomes than a < 1.5-log decrease in GE. CONCLUSION: Our results suggest the clinical relevance of plasma ctDNA analysis in patients with PTCL. However, our findings should be validated by a subsequent study with a larger study population and using a broader gene panel.
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spelling pubmed-98733382023-02-02 Circulating Tumor DNA–Based Genotyping and Monitoring for Predicting Disease Relapses of Patients with Peripheral T-Cell Lymphomas Kim, Seok Jin Kim, Yeon Jeong Yoon, Sang Eun Ryu, Kyung Ju Park, Bon Park, Donghyun Cho, Duck Kim, Hyun-Young Cho, Junhun Ko, Young Hyeh Park, Woong-Yang Kim, Won Seog Cancer Res Treat Original Article PURPOSE: Plasma circulating tumor DNA (ctDNA) could reflect the genetic alterations present in tumor tissues. However, there is little information about the clinical relevance of cell-free DNA genotyping in peripheral T-cell lymphoma (PTCL). MATERIALS AND METHODS: After targeted sequencing plasma cell-free DNA of patients with various subtypes of PTCL (n=94), we analyzed the mutation profiles of plasma ctDNA samples and their predictive value of dynamic ctDNA monitoring for treatment outcomes. RESULTS: Plasma ctDNA mutations were detected in 53 patients (56%, 53/94), and the detection rate of somatic mutations was highest in angioimmunoblastic T-cell lymphoma (24/31, 77%) and PTCL, not otherwise specified (18/29, 62.1%). Somatic mutations were detected in 51 of 66 genes that were sequenced, including the following top 10 ranked genes: RHOA, CREBBP, KMT2D, TP53, IDH2, ALK, MEF2B, SOCS1, CARD11, and KRAS. In the longitudinal assessment of ctDNA mutation, the difference in ctDNA mutation volume after treatment showed a significant correlation with disease relapse or progression. Thus, a ≥ 1.5-log decrease in genome equivalent (GE) between baseline and the end of treatment showed a significant association with better survival outcomes than a < 1.5-log decrease in GE. CONCLUSION: Our results suggest the clinical relevance of plasma ctDNA analysis in patients with PTCL. However, our findings should be validated by a subsequent study with a larger study population and using a broader gene panel. Korean Cancer Association 2023-01 2022-03-02 /pmc/articles/PMC9873338/ /pubmed/35240014 http://dx.doi.org/10.4143/crt.2022.017 Text en Copyright © 2022 by the Korean Cancer Association https://creativecommons.org/licenses/by-nc/4.0/This is an Open-Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Kim, Seok Jin
Kim, Yeon Jeong
Yoon, Sang Eun
Ryu, Kyung Ju
Park, Bon
Park, Donghyun
Cho, Duck
Kim, Hyun-Young
Cho, Junhun
Ko, Young Hyeh
Park, Woong-Yang
Kim, Won Seog
Circulating Tumor DNA–Based Genotyping and Monitoring for Predicting Disease Relapses of Patients with Peripheral T-Cell Lymphomas
title Circulating Tumor DNA–Based Genotyping and Monitoring for Predicting Disease Relapses of Patients with Peripheral T-Cell Lymphomas
title_full Circulating Tumor DNA–Based Genotyping and Monitoring for Predicting Disease Relapses of Patients with Peripheral T-Cell Lymphomas
title_fullStr Circulating Tumor DNA–Based Genotyping and Monitoring for Predicting Disease Relapses of Patients with Peripheral T-Cell Lymphomas
title_full_unstemmed Circulating Tumor DNA–Based Genotyping and Monitoring for Predicting Disease Relapses of Patients with Peripheral T-Cell Lymphomas
title_short Circulating Tumor DNA–Based Genotyping and Monitoring for Predicting Disease Relapses of Patients with Peripheral T-Cell Lymphomas
title_sort circulating tumor dna–based genotyping and monitoring for predicting disease relapses of patients with peripheral t-cell lymphomas
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9873338/
https://www.ncbi.nlm.nih.gov/pubmed/35240014
http://dx.doi.org/10.4143/crt.2022.017
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