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Deep learning prediction of non-perfused volume without contrast agents during prostate ablation therapy
The non-perfused volume (NPV) is an important indicator of treatment success immediately after prostate ablation. However, visualization of the NPV first requires an injection of MRI contrast agents into the bloodstream, which has many downsides. Purpose of this study was to develop a deep learning...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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The Korean Society of Medical and Biological Engineering
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9873841/ https://www.ncbi.nlm.nih.gov/pubmed/36711157 http://dx.doi.org/10.1007/s13534-022-00250-y |
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author | Wright, Cameron Mäkelä, Pietari Bigot, Alexandre Anttinen, Mikael Boström, Peter J. Blanco Sequeiros, Roberto |
author_facet | Wright, Cameron Mäkelä, Pietari Bigot, Alexandre Anttinen, Mikael Boström, Peter J. Blanco Sequeiros, Roberto |
author_sort | Wright, Cameron |
collection | PubMed |
description | The non-perfused volume (NPV) is an important indicator of treatment success immediately after prostate ablation. However, visualization of the NPV first requires an injection of MRI contrast agents into the bloodstream, which has many downsides. Purpose of this study was to develop a deep learning model capable of predicting the NPV immediately after prostate ablation therapy without the need for MRI contrast agents. A modified 2D deep learning UNet model was developed to predict the post-treatment NPV. MRI imaging data from 95 patients who had previously undergone prostate ablation therapy for treatment of localized prostate cancer were used to train, validate, and test the model. Model inputs were T1/T2-weighted and thermometry MRI images, which were always acquired without any MRI contrast agents and prior to the final NPV image on treatment-day. Model output was the predicted NPV. Model accuracy was assessed using the Dice-Similarity Coefficient (DSC) by comparing the predicted to ground truth NPV. A radiologist also performed a qualitative assessment of NPV. Mean (std) DSC score for predicted NPV was 85% ± 8.1% compared to ground truth. Model performance was significantly better for slices with larger prostate radii (> 24 mm) and for whole-gland rather than partial ablation slices. The predicted NPV was indistinguishable from ground truth for 31% of images. Feasibility of predicting NPV using a UNet model without MRI contrast agents was clearly established. If developed further, this could improve patient treatment outcomes and could obviate the need for contrast agents altogether. Trial Registration Numbers Three studies were used to populate the data: NCT02766543, NCT03814252 and NCT03350529. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s13534-022-00250-y. |
format | Online Article Text |
id | pubmed-9873841 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | The Korean Society of Medical and Biological Engineering |
record_format | MEDLINE/PubMed |
spelling | pubmed-98738412023-01-26 Deep learning prediction of non-perfused volume without contrast agents during prostate ablation therapy Wright, Cameron Mäkelä, Pietari Bigot, Alexandre Anttinen, Mikael Boström, Peter J. Blanco Sequeiros, Roberto Biomed Eng Lett Original Article The non-perfused volume (NPV) is an important indicator of treatment success immediately after prostate ablation. However, visualization of the NPV first requires an injection of MRI contrast agents into the bloodstream, which has many downsides. Purpose of this study was to develop a deep learning model capable of predicting the NPV immediately after prostate ablation therapy without the need for MRI contrast agents. A modified 2D deep learning UNet model was developed to predict the post-treatment NPV. MRI imaging data from 95 patients who had previously undergone prostate ablation therapy for treatment of localized prostate cancer were used to train, validate, and test the model. Model inputs were T1/T2-weighted and thermometry MRI images, which were always acquired without any MRI contrast agents and prior to the final NPV image on treatment-day. Model output was the predicted NPV. Model accuracy was assessed using the Dice-Similarity Coefficient (DSC) by comparing the predicted to ground truth NPV. A radiologist also performed a qualitative assessment of NPV. Mean (std) DSC score for predicted NPV was 85% ± 8.1% compared to ground truth. Model performance was significantly better for slices with larger prostate radii (> 24 mm) and for whole-gland rather than partial ablation slices. The predicted NPV was indistinguishable from ground truth for 31% of images. Feasibility of predicting NPV using a UNet model without MRI contrast agents was clearly established. If developed further, this could improve patient treatment outcomes and could obviate the need for contrast agents altogether. Trial Registration Numbers Three studies were used to populate the data: NCT02766543, NCT03814252 and NCT03350529. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s13534-022-00250-y. The Korean Society of Medical and Biological Engineering 2022-11-08 /pmc/articles/PMC9873841/ /pubmed/36711157 http://dx.doi.org/10.1007/s13534-022-00250-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Article Wright, Cameron Mäkelä, Pietari Bigot, Alexandre Anttinen, Mikael Boström, Peter J. Blanco Sequeiros, Roberto Deep learning prediction of non-perfused volume without contrast agents during prostate ablation therapy |
title | Deep learning prediction of non-perfused volume without contrast agents during prostate ablation therapy |
title_full | Deep learning prediction of non-perfused volume without contrast agents during prostate ablation therapy |
title_fullStr | Deep learning prediction of non-perfused volume without contrast agents during prostate ablation therapy |
title_full_unstemmed | Deep learning prediction of non-perfused volume without contrast agents during prostate ablation therapy |
title_short | Deep learning prediction of non-perfused volume without contrast agents during prostate ablation therapy |
title_sort | deep learning prediction of non-perfused volume without contrast agents during prostate ablation therapy |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9873841/ https://www.ncbi.nlm.nih.gov/pubmed/36711157 http://dx.doi.org/10.1007/s13534-022-00250-y |
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