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Complete genome analysis of the African swine fever virus isolated from a wild boar responsible for the first viral outbreak in Korea, 2019

African swine fever (ASF), a highly contagious and severe hemorrhagic viral disease in swine, is emerging as a major threat not only in Korea but also worldwide. The first confirmed case of ASF in Korea was reported in 2019. Despite the occurrence of ASF in Korea, only a few studies have genetically...

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Autores principales: Kim, Garam, Park, Jung-Eun, Kim, So-Jeong, Kim, Yeonji, Kim, Wonjun, Kim, Yong-Kwan, Jheong, WeonHwa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9875005/
https://www.ncbi.nlm.nih.gov/pubmed/36713858
http://dx.doi.org/10.3389/fvets.2022.1080397
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author Kim, Garam
Park, Jung-Eun
Kim, So-Jeong
Kim, Yeonji
Kim, Wonjun
Kim, Yong-Kwan
Jheong, WeonHwa
author_facet Kim, Garam
Park, Jung-Eun
Kim, So-Jeong
Kim, Yeonji
Kim, Wonjun
Kim, Yong-Kwan
Jheong, WeonHwa
author_sort Kim, Garam
collection PubMed
description African swine fever (ASF), a highly contagious and severe hemorrhagic viral disease in swine, is emerging as a major threat not only in Korea but also worldwide. The first confirmed case of ASF in Korea was reported in 2019. Despite the occurrence of ASF in Korea, only a few studies have genetically characterized the causative ASF virus (ASFV). In this study, we aimed to genetically characterize the ASFV responsible for the 2019 outbreak in Korea. The genome of the ASFV isolated during the first outbreak in Korea was analyzed. The Korea/YC1/2019 strain has 188,950 base pairs, with a GC content of 38.4%. The complete genome sequence was compared with other ASFV genomes annotated in the NCBI database. The Korea/YC1/2019 strain shared the highest similarity with Georgia 2007, Belgium 2018/1, and ASFV-wbBS01 strains. This study expands our knowledge of the genetic diversity of ASFV, providing valuable information for epidemiology, diagnostics, therapies, and vaccine development.
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spelling pubmed-98750052023-01-26 Complete genome analysis of the African swine fever virus isolated from a wild boar responsible for the first viral outbreak in Korea, 2019 Kim, Garam Park, Jung-Eun Kim, So-Jeong Kim, Yeonji Kim, Wonjun Kim, Yong-Kwan Jheong, WeonHwa Front Vet Sci Veterinary Science African swine fever (ASF), a highly contagious and severe hemorrhagic viral disease in swine, is emerging as a major threat not only in Korea but also worldwide. The first confirmed case of ASF in Korea was reported in 2019. Despite the occurrence of ASF in Korea, only a few studies have genetically characterized the causative ASF virus (ASFV). In this study, we aimed to genetically characterize the ASFV responsible for the 2019 outbreak in Korea. The genome of the ASFV isolated during the first outbreak in Korea was analyzed. The Korea/YC1/2019 strain has 188,950 base pairs, with a GC content of 38.4%. The complete genome sequence was compared with other ASFV genomes annotated in the NCBI database. The Korea/YC1/2019 strain shared the highest similarity with Georgia 2007, Belgium 2018/1, and ASFV-wbBS01 strains. This study expands our knowledge of the genetic diversity of ASFV, providing valuable information for epidemiology, diagnostics, therapies, and vaccine development. Frontiers Media S.A. 2023-01-11 /pmc/articles/PMC9875005/ /pubmed/36713858 http://dx.doi.org/10.3389/fvets.2022.1080397 Text en Copyright © 2023 Kim, Park, Kim, Kim, Kim, Kim and Jheong. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Veterinary Science
Kim, Garam
Park, Jung-Eun
Kim, So-Jeong
Kim, Yeonji
Kim, Wonjun
Kim, Yong-Kwan
Jheong, WeonHwa
Complete genome analysis of the African swine fever virus isolated from a wild boar responsible for the first viral outbreak in Korea, 2019
title Complete genome analysis of the African swine fever virus isolated from a wild boar responsible for the first viral outbreak in Korea, 2019
title_full Complete genome analysis of the African swine fever virus isolated from a wild boar responsible for the first viral outbreak in Korea, 2019
title_fullStr Complete genome analysis of the African swine fever virus isolated from a wild boar responsible for the first viral outbreak in Korea, 2019
title_full_unstemmed Complete genome analysis of the African swine fever virus isolated from a wild boar responsible for the first viral outbreak in Korea, 2019
title_short Complete genome analysis of the African swine fever virus isolated from a wild boar responsible for the first viral outbreak in Korea, 2019
title_sort complete genome analysis of the african swine fever virus isolated from a wild boar responsible for the first viral outbreak in korea, 2019
topic Veterinary Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9875005/
https://www.ncbi.nlm.nih.gov/pubmed/36713858
http://dx.doi.org/10.3389/fvets.2022.1080397
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