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Sentiment analysis of medical record notes for lung cancer patients at the Department of Veterans Affairs

Natural language processing of medical records offers tremendous potential to improve the patient experience. Sentiment analysis of clinical notes has been performed with mixed results, often highlighting the issue that dictionary ratings are not domain specific. Here, for the first time, we re-cali...

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Autores principales: Elbers, Danne C., La, Jennifer, Minot, Joshua R., Gramling, Robert, Brophy, Mary T., Do, Nhan V., Fillmore, Nathanael R., Dodds, Peter S., Danforth, Christopher M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9876289/
https://www.ncbi.nlm.nih.gov/pubmed/36696437
http://dx.doi.org/10.1371/journal.pone.0280931
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author Elbers, Danne C.
La, Jennifer
Minot, Joshua R.
Gramling, Robert
Brophy, Mary T.
Do, Nhan V.
Fillmore, Nathanael R.
Dodds, Peter S.
Danforth, Christopher M.
author_facet Elbers, Danne C.
La, Jennifer
Minot, Joshua R.
Gramling, Robert
Brophy, Mary T.
Do, Nhan V.
Fillmore, Nathanael R.
Dodds, Peter S.
Danforth, Christopher M.
author_sort Elbers, Danne C.
collection PubMed
description Natural language processing of medical records offers tremendous potential to improve the patient experience. Sentiment analysis of clinical notes has been performed with mixed results, often highlighting the issue that dictionary ratings are not domain specific. Here, for the first time, we re-calibrate the labMT sentiment dictionary on 3.5M clinical notes describing 10,000 patients diagnosed with lung cancer at the Department of Veterans Affairs. The sentiment score of notes was calculated for two years after date of diagnosis and evaluated against a lab test (platelet count) and a combination of data points (treatments). We found that the oncology specific labMT dictionary, after re-calibration for the clinical oncology domain, produces a promising signal in notes that can be detected based on a comparative analysis to the aforementioned parameters.
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spelling pubmed-98762892023-01-26 Sentiment analysis of medical record notes for lung cancer patients at the Department of Veterans Affairs Elbers, Danne C. La, Jennifer Minot, Joshua R. Gramling, Robert Brophy, Mary T. Do, Nhan V. Fillmore, Nathanael R. Dodds, Peter S. Danforth, Christopher M. PLoS One Research Article Natural language processing of medical records offers tremendous potential to improve the patient experience. Sentiment analysis of clinical notes has been performed with mixed results, often highlighting the issue that dictionary ratings are not domain specific. Here, for the first time, we re-calibrate the labMT sentiment dictionary on 3.5M clinical notes describing 10,000 patients diagnosed with lung cancer at the Department of Veterans Affairs. The sentiment score of notes was calculated for two years after date of diagnosis and evaluated against a lab test (platelet count) and a combination of data points (treatments). We found that the oncology specific labMT dictionary, after re-calibration for the clinical oncology domain, produces a promising signal in notes that can be detected based on a comparative analysis to the aforementioned parameters. Public Library of Science 2023-01-25 /pmc/articles/PMC9876289/ /pubmed/36696437 http://dx.doi.org/10.1371/journal.pone.0280931 Text en https://creativecommons.org/publicdomain/zero/1.0/This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Elbers, Danne C.
La, Jennifer
Minot, Joshua R.
Gramling, Robert
Brophy, Mary T.
Do, Nhan V.
Fillmore, Nathanael R.
Dodds, Peter S.
Danforth, Christopher M.
Sentiment analysis of medical record notes for lung cancer patients at the Department of Veterans Affairs
title Sentiment analysis of medical record notes for lung cancer patients at the Department of Veterans Affairs
title_full Sentiment analysis of medical record notes for lung cancer patients at the Department of Veterans Affairs
title_fullStr Sentiment analysis of medical record notes for lung cancer patients at the Department of Veterans Affairs
title_full_unstemmed Sentiment analysis of medical record notes for lung cancer patients at the Department of Veterans Affairs
title_short Sentiment analysis of medical record notes for lung cancer patients at the Department of Veterans Affairs
title_sort sentiment analysis of medical record notes for lung cancer patients at the department of veterans affairs
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9876289/
https://www.ncbi.nlm.nih.gov/pubmed/36696437
http://dx.doi.org/10.1371/journal.pone.0280931
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