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Isolation of single cells from human hepatoblastoma tissues for whole-exome sequencing

By combining single-cell processing with whole-exome sequencing, we have developed single-cell whole-exome sequencing to investigate the mechanisms of hepatoblastoma development and to provide potential targets and therapeutic approaches for clinical treatment. In the following protocol, we outline...

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Detalles Bibliográficos
Autores principales: He, Jian, Meng, Mei, Zhou, Xianchao, Gao, Rui, Wang, Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9876968/
https://www.ncbi.nlm.nih.gov/pubmed/36853859
http://dx.doi.org/10.1016/j.xpro.2023.102052
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author He, Jian
Meng, Mei
Zhou, Xianchao
Gao, Rui
Wang, Hui
author_facet He, Jian
Meng, Mei
Zhou, Xianchao
Gao, Rui
Wang, Hui
author_sort He, Jian
collection PubMed
description By combining single-cell processing with whole-exome sequencing, we have developed single-cell whole-exome sequencing to investigate the mechanisms of hepatoblastoma development and to provide potential targets and therapeutic approaches for clinical treatment. In the following protocol, we outline the steps involved in single-cell sorting, whole-genome amplification, amplification uniformity estimation, and whole-exome library construction. In addition to the cells we use, this protocol is also suitable for other cell lines and cell types. For complete details on the use and execution of this protocol, please refer to Jian et al. (2023).
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spelling pubmed-98769682023-01-27 Isolation of single cells from human hepatoblastoma tissues for whole-exome sequencing He, Jian Meng, Mei Zhou, Xianchao Gao, Rui Wang, Hui STAR Protoc Protocol By combining single-cell processing with whole-exome sequencing, we have developed single-cell whole-exome sequencing to investigate the mechanisms of hepatoblastoma development and to provide potential targets and therapeutic approaches for clinical treatment. In the following protocol, we outline the steps involved in single-cell sorting, whole-genome amplification, amplification uniformity estimation, and whole-exome library construction. In addition to the cells we use, this protocol is also suitable for other cell lines and cell types. For complete details on the use and execution of this protocol, please refer to Jian et al. (2023). Elsevier 2023-01-21 /pmc/articles/PMC9876968/ /pubmed/36853859 http://dx.doi.org/10.1016/j.xpro.2023.102052 Text en © 2023. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Protocol
He, Jian
Meng, Mei
Zhou, Xianchao
Gao, Rui
Wang, Hui
Isolation of single cells from human hepatoblastoma tissues for whole-exome sequencing
title Isolation of single cells from human hepatoblastoma tissues for whole-exome sequencing
title_full Isolation of single cells from human hepatoblastoma tissues for whole-exome sequencing
title_fullStr Isolation of single cells from human hepatoblastoma tissues for whole-exome sequencing
title_full_unstemmed Isolation of single cells from human hepatoblastoma tissues for whole-exome sequencing
title_short Isolation of single cells from human hepatoblastoma tissues for whole-exome sequencing
title_sort isolation of single cells from human hepatoblastoma tissues for whole-exome sequencing
topic Protocol
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9876968/
https://www.ncbi.nlm.nih.gov/pubmed/36853859
http://dx.doi.org/10.1016/j.xpro.2023.102052
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