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Activation of L-lactate oxidase by the formation of enzyme assemblies through liquid–liquid phase separation

The assembly state of enzymes is gaining interest as a mechanism for regulating the function of enzymes in living cells. One of the current topics in enzymology is the relationship between enzyme activity and the assembly state due to liquid–liquid phase separation. In this study, we demonstrated en...

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Autores principales: Ura, Tomoto, Kagawa, Ako, Sakakibara, Nanako, Yagi, Hiromasa, Tochio, Naoya, Kigawa, Takanori, Shiraki, Kentaro, Mikawa, Tsutomu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9877012/
https://www.ncbi.nlm.nih.gov/pubmed/36697449
http://dx.doi.org/10.1038/s41598-023-28040-1
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author Ura, Tomoto
Kagawa, Ako
Sakakibara, Nanako
Yagi, Hiromasa
Tochio, Naoya
Kigawa, Takanori
Shiraki, Kentaro
Mikawa, Tsutomu
author_facet Ura, Tomoto
Kagawa, Ako
Sakakibara, Nanako
Yagi, Hiromasa
Tochio, Naoya
Kigawa, Takanori
Shiraki, Kentaro
Mikawa, Tsutomu
author_sort Ura, Tomoto
collection PubMed
description The assembly state of enzymes is gaining interest as a mechanism for regulating the function of enzymes in living cells. One of the current topics in enzymology is the relationship between enzyme activity and the assembly state due to liquid–liquid phase separation. In this study, we demonstrated enzyme activation via the formation of enzyme assemblies using L-lactate oxidase (LOX). LOX formed hundreds of nanometer-scale assemblies with poly-L-lysine (PLL). In the presence of ammonium sulfate, the LOX-PLL clusters formed micrometer-scale liquid droplets. The enzyme activities of LOX in clusters and droplets were one order of magnitude higher than those in the dispersed state, owing to a decrease in K(M) and an increase in k(cat). Moreover, the clusters exhibited a higher activation effect than the droplets. In addition, the conformation of LOX changed in the clusters, resulting in increased enzyme activation. Understanding enzyme activation and assembly states provides important information regarding enzyme function in living cells, in addition to biotechnology applications.
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spelling pubmed-98770122023-01-27 Activation of L-lactate oxidase by the formation of enzyme assemblies through liquid–liquid phase separation Ura, Tomoto Kagawa, Ako Sakakibara, Nanako Yagi, Hiromasa Tochio, Naoya Kigawa, Takanori Shiraki, Kentaro Mikawa, Tsutomu Sci Rep Article The assembly state of enzymes is gaining interest as a mechanism for regulating the function of enzymes in living cells. One of the current topics in enzymology is the relationship between enzyme activity and the assembly state due to liquid–liquid phase separation. In this study, we demonstrated enzyme activation via the formation of enzyme assemblies using L-lactate oxidase (LOX). LOX formed hundreds of nanometer-scale assemblies with poly-L-lysine (PLL). In the presence of ammonium sulfate, the LOX-PLL clusters formed micrometer-scale liquid droplets. The enzyme activities of LOX in clusters and droplets were one order of magnitude higher than those in the dispersed state, owing to a decrease in K(M) and an increase in k(cat). Moreover, the clusters exhibited a higher activation effect than the droplets. In addition, the conformation of LOX changed in the clusters, resulting in increased enzyme activation. Understanding enzyme activation and assembly states provides important information regarding enzyme function in living cells, in addition to biotechnology applications. Nature Publishing Group UK 2023-01-25 /pmc/articles/PMC9877012/ /pubmed/36697449 http://dx.doi.org/10.1038/s41598-023-28040-1 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Ura, Tomoto
Kagawa, Ako
Sakakibara, Nanako
Yagi, Hiromasa
Tochio, Naoya
Kigawa, Takanori
Shiraki, Kentaro
Mikawa, Tsutomu
Activation of L-lactate oxidase by the formation of enzyme assemblies through liquid–liquid phase separation
title Activation of L-lactate oxidase by the formation of enzyme assemblies through liquid–liquid phase separation
title_full Activation of L-lactate oxidase by the formation of enzyme assemblies through liquid–liquid phase separation
title_fullStr Activation of L-lactate oxidase by the formation of enzyme assemblies through liquid–liquid phase separation
title_full_unstemmed Activation of L-lactate oxidase by the formation of enzyme assemblies through liquid–liquid phase separation
title_short Activation of L-lactate oxidase by the formation of enzyme assemblies through liquid–liquid phase separation
title_sort activation of l-lactate oxidase by the formation of enzyme assemblies through liquid–liquid phase separation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9877012/
https://www.ncbi.nlm.nih.gov/pubmed/36697449
http://dx.doi.org/10.1038/s41598-023-28040-1
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