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Assessing dengue fever risk in Costa Rica by using climate variables and machine learning techniques
Dengue fever is a vector-borne disease affecting millions yearly, mostly in tropical and subtropical countries. Driven mainly by social and environmental factors, dengue incidence and geographical expansion have increased in recent decades. Therefore, understanding how climate variables drive dengue...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9879398/ https://www.ncbi.nlm.nih.gov/pubmed/36638136 http://dx.doi.org/10.1371/journal.pntd.0011047 |
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author | Barboza, Luis A. Chou-Chen, Shu-Wei Vásquez, Paola García, Yury E. Calvo, Juan G. Hidalgo, Hugo G. Sanchez, Fabio |
author_facet | Barboza, Luis A. Chou-Chen, Shu-Wei Vásquez, Paola García, Yury E. Calvo, Juan G. Hidalgo, Hugo G. Sanchez, Fabio |
author_sort | Barboza, Luis A. |
collection | PubMed |
description | Dengue fever is a vector-borne disease affecting millions yearly, mostly in tropical and subtropical countries. Driven mainly by social and environmental factors, dengue incidence and geographical expansion have increased in recent decades. Therefore, understanding how climate variables drive dengue outbreaks is challenging and a problem of interest for decision-makers that could aid in improving surveillance and resource allocation. Here, we explore the effect of climate variables on relative dengue risk in 32 cantons of interest for public health authorities in Costa Rica. Relative dengue risk is forecast using a Generalized Additive Model for location, scale, and shape and a Random Forest approach. Models use a training period from 2000 to 2020 and predicted climatic variables obtained with a vector auto-regressive model. Results show reliable projections, and climate variables predictions allow for a prospective instead of a retrospective study. |
format | Online Article Text |
id | pubmed-9879398 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-98793982023-01-27 Assessing dengue fever risk in Costa Rica by using climate variables and machine learning techniques Barboza, Luis A. Chou-Chen, Shu-Wei Vásquez, Paola García, Yury E. Calvo, Juan G. Hidalgo, Hugo G. Sanchez, Fabio PLoS Negl Trop Dis Research Article Dengue fever is a vector-borne disease affecting millions yearly, mostly in tropical and subtropical countries. Driven mainly by social and environmental factors, dengue incidence and geographical expansion have increased in recent decades. Therefore, understanding how climate variables drive dengue outbreaks is challenging and a problem of interest for decision-makers that could aid in improving surveillance and resource allocation. Here, we explore the effect of climate variables on relative dengue risk in 32 cantons of interest for public health authorities in Costa Rica. Relative dengue risk is forecast using a Generalized Additive Model for location, scale, and shape and a Random Forest approach. Models use a training period from 2000 to 2020 and predicted climatic variables obtained with a vector auto-regressive model. Results show reliable projections, and climate variables predictions allow for a prospective instead of a retrospective study. Public Library of Science 2023-01-13 /pmc/articles/PMC9879398/ /pubmed/36638136 http://dx.doi.org/10.1371/journal.pntd.0011047 Text en © 2023 Barboza et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Barboza, Luis A. Chou-Chen, Shu-Wei Vásquez, Paola García, Yury E. Calvo, Juan G. Hidalgo, Hugo G. Sanchez, Fabio Assessing dengue fever risk in Costa Rica by using climate variables and machine learning techniques |
title | Assessing dengue fever risk in Costa Rica by using climate variables and machine learning techniques |
title_full | Assessing dengue fever risk in Costa Rica by using climate variables and machine learning techniques |
title_fullStr | Assessing dengue fever risk in Costa Rica by using climate variables and machine learning techniques |
title_full_unstemmed | Assessing dengue fever risk in Costa Rica by using climate variables and machine learning techniques |
title_short | Assessing dengue fever risk in Costa Rica by using climate variables and machine learning techniques |
title_sort | assessing dengue fever risk in costa rica by using climate variables and machine learning techniques |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9879398/ https://www.ncbi.nlm.nih.gov/pubmed/36638136 http://dx.doi.org/10.1371/journal.pntd.0011047 |
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