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Biomolecular condensates formed by designer minimalistic peptides

Inspired by the role of intracellular liquid-liquid phase separation (LLPS) in formation of membraneless organelles, there is great interest in developing dynamic compartments formed by LLPS of intrinsically disordered proteins (IDPs) or short peptides. However, the molecular mechanisms underlying t...

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Autores principales: Baruch Leshem, Avigail, Sloan-Dennison, Sian, Massarano, Tlalit, Ben-David, Shavit, Graham, Duncan, Faulds, Karen, Gottlieb, Hugo E., Chill, Jordan H., Lampel, Ayala
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9879991/
https://www.ncbi.nlm.nih.gov/pubmed/36702825
http://dx.doi.org/10.1038/s41467-023-36060-8
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author Baruch Leshem, Avigail
Sloan-Dennison, Sian
Massarano, Tlalit
Ben-David, Shavit
Graham, Duncan
Faulds, Karen
Gottlieb, Hugo E.
Chill, Jordan H.
Lampel, Ayala
author_facet Baruch Leshem, Avigail
Sloan-Dennison, Sian
Massarano, Tlalit
Ben-David, Shavit
Graham, Duncan
Faulds, Karen
Gottlieb, Hugo E.
Chill, Jordan H.
Lampel, Ayala
author_sort Baruch Leshem, Avigail
collection PubMed
description Inspired by the role of intracellular liquid-liquid phase separation (LLPS) in formation of membraneless organelles, there is great interest in developing dynamic compartments formed by LLPS of intrinsically disordered proteins (IDPs) or short peptides. However, the molecular mechanisms underlying the formation of biomolecular condensates have not been fully elucidated, rendering on-demand design of synthetic condensates with tailored physico-chemical functionalities a significant challenge. To address this need, here we design a library of LLPS-promoting peptide building blocks composed of various assembly domains. We show that the LLPS propensity, dynamics, and encapsulation efficiency of compartments can be tuned by changes to the peptide composition. Specifically, with the aid of Raman and NMR spectroscopy, we show that interactions between arginine and aromatic amino acids underlie droplet formation, and that both intra- and intermolecular interactions dictate droplet dynamics. The resulting sequence-structure-function correlation could support the future development of compartments for a variety of applications.
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spelling pubmed-98799912023-01-28 Biomolecular condensates formed by designer minimalistic peptides Baruch Leshem, Avigail Sloan-Dennison, Sian Massarano, Tlalit Ben-David, Shavit Graham, Duncan Faulds, Karen Gottlieb, Hugo E. Chill, Jordan H. Lampel, Ayala Nat Commun Article Inspired by the role of intracellular liquid-liquid phase separation (LLPS) in formation of membraneless organelles, there is great interest in developing dynamic compartments formed by LLPS of intrinsically disordered proteins (IDPs) or short peptides. However, the molecular mechanisms underlying the formation of biomolecular condensates have not been fully elucidated, rendering on-demand design of synthetic condensates with tailored physico-chemical functionalities a significant challenge. To address this need, here we design a library of LLPS-promoting peptide building blocks composed of various assembly domains. We show that the LLPS propensity, dynamics, and encapsulation efficiency of compartments can be tuned by changes to the peptide composition. Specifically, with the aid of Raman and NMR spectroscopy, we show that interactions between arginine and aromatic amino acids underlie droplet formation, and that both intra- and intermolecular interactions dictate droplet dynamics. The resulting sequence-structure-function correlation could support the future development of compartments for a variety of applications. Nature Publishing Group UK 2023-01-26 /pmc/articles/PMC9879991/ /pubmed/36702825 http://dx.doi.org/10.1038/s41467-023-36060-8 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Baruch Leshem, Avigail
Sloan-Dennison, Sian
Massarano, Tlalit
Ben-David, Shavit
Graham, Duncan
Faulds, Karen
Gottlieb, Hugo E.
Chill, Jordan H.
Lampel, Ayala
Biomolecular condensates formed by designer minimalistic peptides
title Biomolecular condensates formed by designer minimalistic peptides
title_full Biomolecular condensates formed by designer minimalistic peptides
title_fullStr Biomolecular condensates formed by designer minimalistic peptides
title_full_unstemmed Biomolecular condensates formed by designer minimalistic peptides
title_short Biomolecular condensates formed by designer minimalistic peptides
title_sort biomolecular condensates formed by designer minimalistic peptides
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9879991/
https://www.ncbi.nlm.nih.gov/pubmed/36702825
http://dx.doi.org/10.1038/s41467-023-36060-8
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