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Feature preserving mesh network for semantic segmentation of retinal vasculature to support ophthalmic disease analysis

INTRODUCTION: Ophthalmic diseases are approaching an alarming count across the globe. Typically, ophthalmologists depend on manual methods for the analysis of different ophthalmic diseases such as glaucoma, Sickle cell retinopathy (SCR), diabetic retinopathy, and hypertensive retinopathy. All these...

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Autores principales: Imran, Syed Muhammad Ali, Saleem, Muhammad Waqas, Hameed, Muhammad Talha, Hussain, Abida, Naqvi, Rizwan Ali, Lee, Seung Won
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9880050/
https://www.ncbi.nlm.nih.gov/pubmed/36714120
http://dx.doi.org/10.3389/fmed.2022.1040562
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author Imran, Syed Muhammad Ali
Saleem, Muhammad Waqas
Hameed, Muhammad Talha
Hussain, Abida
Naqvi, Rizwan Ali
Lee, Seung Won
author_facet Imran, Syed Muhammad Ali
Saleem, Muhammad Waqas
Hameed, Muhammad Talha
Hussain, Abida
Naqvi, Rizwan Ali
Lee, Seung Won
author_sort Imran, Syed Muhammad Ali
collection PubMed
description INTRODUCTION: Ophthalmic diseases are approaching an alarming count across the globe. Typically, ophthalmologists depend on manual methods for the analysis of different ophthalmic diseases such as glaucoma, Sickle cell retinopathy (SCR), diabetic retinopathy, and hypertensive retinopathy. All these manual assessments are not reliable, time-consuming, tedious, and prone to error. Therefore, automatic methods are desirable to replace conventional approaches. The accuracy of this segmentation of these vessels using automated approaches directly depends on the quality of fundus images. Retinal vessels are assumed as a potential biomarker for the diagnosis of many ophthalmic diseases. Mostly newly developed ophthalmic diseases contain minor changes in vasculature which is a critical job for the early detection and analysis of disease. METHOD: Several artificial intelligence-based methods suggested intelligent solutions for automated retinal vessel detection. However, existing methods exhibited significant limitations in segmentation performance, complexity, and computational efficiency. Specifically, most of the existing methods failed in detecting small vessels owing to vanishing gradient problems. To overcome the stated problems, an intelligence-based automated shallow network with high performance and low cost is designed named Feature Preserving Mesh Network (FPM-Net) for the accurate segmentation of retinal vessels. FPM-Net employs a feature-preserving block that preserves the spatial features and helps in maintaining a better segmentation performance. Similarly, FPM-Net architecture uses a series of feature concatenation that also boosts the overall segmentation performance. Finally, preserved features, low-level input image information, and up-sampled spatial features are aggregated at the final concatenation stage for improved pixel prediction accuracy. The technique is reliable since it performs better on the DRIVE database, CHASE-DB1 database, and STARE dataset. RESULTS AND DISCUSSION: Experimental outcomes confirm that FPM-Net outperforms state-of-the-art techniques with superior computational efficiency. In addition, presented results are achieved without using any preprocessing or postprocessing scheme. Our proposed method FPM-Net gives improvement results which can be observed with DRIVE datasets, it gives Se, Sp, and Acc as 0.8285, 0.98270, 0.92920, for CHASE-DB1 dataset 0.8219, 0.9840, 0.9728 and STARE datasets it produces 0.8618, 0.9819 and 0.9727 respectively. Which is a remarkable difference and enhancement as compared to the conventional methods using only 2.45 million trainable parameters.
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spelling pubmed-98800502023-01-28 Feature preserving mesh network for semantic segmentation of retinal vasculature to support ophthalmic disease analysis Imran, Syed Muhammad Ali Saleem, Muhammad Waqas Hameed, Muhammad Talha Hussain, Abida Naqvi, Rizwan Ali Lee, Seung Won Front Med (Lausanne) Medicine INTRODUCTION: Ophthalmic diseases are approaching an alarming count across the globe. Typically, ophthalmologists depend on manual methods for the analysis of different ophthalmic diseases such as glaucoma, Sickle cell retinopathy (SCR), diabetic retinopathy, and hypertensive retinopathy. All these manual assessments are not reliable, time-consuming, tedious, and prone to error. Therefore, automatic methods are desirable to replace conventional approaches. The accuracy of this segmentation of these vessels using automated approaches directly depends on the quality of fundus images. Retinal vessels are assumed as a potential biomarker for the diagnosis of many ophthalmic diseases. Mostly newly developed ophthalmic diseases contain minor changes in vasculature which is a critical job for the early detection and analysis of disease. METHOD: Several artificial intelligence-based methods suggested intelligent solutions for automated retinal vessel detection. However, existing methods exhibited significant limitations in segmentation performance, complexity, and computational efficiency. Specifically, most of the existing methods failed in detecting small vessels owing to vanishing gradient problems. To overcome the stated problems, an intelligence-based automated shallow network with high performance and low cost is designed named Feature Preserving Mesh Network (FPM-Net) for the accurate segmentation of retinal vessels. FPM-Net employs a feature-preserving block that preserves the spatial features and helps in maintaining a better segmentation performance. Similarly, FPM-Net architecture uses a series of feature concatenation that also boosts the overall segmentation performance. Finally, preserved features, low-level input image information, and up-sampled spatial features are aggregated at the final concatenation stage for improved pixel prediction accuracy. The technique is reliable since it performs better on the DRIVE database, CHASE-DB1 database, and STARE dataset. RESULTS AND DISCUSSION: Experimental outcomes confirm that FPM-Net outperforms state-of-the-art techniques with superior computational efficiency. In addition, presented results are achieved without using any preprocessing or postprocessing scheme. Our proposed method FPM-Net gives improvement results which can be observed with DRIVE datasets, it gives Se, Sp, and Acc as 0.8285, 0.98270, 0.92920, for CHASE-DB1 dataset 0.8219, 0.9840, 0.9728 and STARE datasets it produces 0.8618, 0.9819 and 0.9727 respectively. Which is a remarkable difference and enhancement as compared to the conventional methods using only 2.45 million trainable parameters. Frontiers Media S.A. 2023-01-13 /pmc/articles/PMC9880050/ /pubmed/36714120 http://dx.doi.org/10.3389/fmed.2022.1040562 Text en Copyright © 2023 Imran, Saleem, Hameed, Hussain, Naqvi and Lee. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medicine
Imran, Syed Muhammad Ali
Saleem, Muhammad Waqas
Hameed, Muhammad Talha
Hussain, Abida
Naqvi, Rizwan Ali
Lee, Seung Won
Feature preserving mesh network for semantic segmentation of retinal vasculature to support ophthalmic disease analysis
title Feature preserving mesh network for semantic segmentation of retinal vasculature to support ophthalmic disease analysis
title_full Feature preserving mesh network for semantic segmentation of retinal vasculature to support ophthalmic disease analysis
title_fullStr Feature preserving mesh network for semantic segmentation of retinal vasculature to support ophthalmic disease analysis
title_full_unstemmed Feature preserving mesh network for semantic segmentation of retinal vasculature to support ophthalmic disease analysis
title_short Feature preserving mesh network for semantic segmentation of retinal vasculature to support ophthalmic disease analysis
title_sort feature preserving mesh network for semantic segmentation of retinal vasculature to support ophthalmic disease analysis
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9880050/
https://www.ncbi.nlm.nih.gov/pubmed/36714120
http://dx.doi.org/10.3389/fmed.2022.1040562
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