Cargando…

Liquid Droplet Aging and Seeded Fibril Formation of the Cytotoxic Granule Associated RNA Binding Protein TIA1 Low Complexity Domain

[Image: see text] Protein domains biased toward a few amino acid types are vital for the formation of biomolecular condensates in living cells. These membraneless compartments are formed by molecules exhibiting a range of molecular motions and structural order. Missense mutations increase condensate...

Descripción completa

Detalles Bibliográficos
Autores principales: Wittmer, Yuuki, Jami, Khaled M., Stowell, Rachelle K., Le, Truc, Hung, Ivan, Murray, Dylan T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9881004/
https://www.ncbi.nlm.nih.gov/pubmed/36638831
http://dx.doi.org/10.1021/jacs.2c08596
_version_ 1784879019250941952
author Wittmer, Yuuki
Jami, Khaled M.
Stowell, Rachelle K.
Le, Truc
Hung, Ivan
Murray, Dylan T.
author_facet Wittmer, Yuuki
Jami, Khaled M.
Stowell, Rachelle K.
Le, Truc
Hung, Ivan
Murray, Dylan T.
author_sort Wittmer, Yuuki
collection PubMed
description [Image: see text] Protein domains biased toward a few amino acid types are vital for the formation of biomolecular condensates in living cells. These membraneless compartments are formed by molecules exhibiting a range of molecular motions and structural order. Missense mutations increase condensate persistence lifetimes or structural order, properties that are thought to underlie pathological protein aggregation. In the context of stress granules associated with neurodegenerative diseases, this process involves the rigidification of protein liquid droplets into β-strand rich protein fibrils. Here, we characterize the molecular mechanism underlying the rigidification of liquid droplets for the low complexity domain of the Cytotoxic granule associated RNA binding protein TIA1 (TIA1) stress granule protein and the influence of a disease mutation linked to neurodegenerative diseases. A seeding procedure and solid state nuclear magnetic resonance measurements show that the low complexity domain converges on a β-strand rich fibril conformation composed of 21% of the sequence. Additional solid state nuclear magnetic resonance measurements and difference spectroscopy show that aged liquid droplets of wild type and a proline-to-leucine mutant low complexity domain are composed of fibril assemblies that are conformationally heterogeneous and structurally distinct from the seeded fibril preparation. Regarding low complexity domains, our data support the functional template-driven formation of conformationally homogeneous structures, that rigidification of liquid droplets into conformationally heterogenous structures promotes pathological interactions, and that the effect of disease mutations is more nuanced than increasing thermodynamic stability or increasing β-strand structure content.
format Online
Article
Text
id pubmed-9881004
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher American Chemical Society
record_format MEDLINE/PubMed
spelling pubmed-98810042023-01-28 Liquid Droplet Aging and Seeded Fibril Formation of the Cytotoxic Granule Associated RNA Binding Protein TIA1 Low Complexity Domain Wittmer, Yuuki Jami, Khaled M. Stowell, Rachelle K. Le, Truc Hung, Ivan Murray, Dylan T. J Am Chem Soc [Image: see text] Protein domains biased toward a few amino acid types are vital for the formation of biomolecular condensates in living cells. These membraneless compartments are formed by molecules exhibiting a range of molecular motions and structural order. Missense mutations increase condensate persistence lifetimes or structural order, properties that are thought to underlie pathological protein aggregation. In the context of stress granules associated with neurodegenerative diseases, this process involves the rigidification of protein liquid droplets into β-strand rich protein fibrils. Here, we characterize the molecular mechanism underlying the rigidification of liquid droplets for the low complexity domain of the Cytotoxic granule associated RNA binding protein TIA1 (TIA1) stress granule protein and the influence of a disease mutation linked to neurodegenerative diseases. A seeding procedure and solid state nuclear magnetic resonance measurements show that the low complexity domain converges on a β-strand rich fibril conformation composed of 21% of the sequence. Additional solid state nuclear magnetic resonance measurements and difference spectroscopy show that aged liquid droplets of wild type and a proline-to-leucine mutant low complexity domain are composed of fibril assemblies that are conformationally heterogeneous and structurally distinct from the seeded fibril preparation. Regarding low complexity domains, our data support the functional template-driven formation of conformationally homogeneous structures, that rigidification of liquid droplets into conformationally heterogenous structures promotes pathological interactions, and that the effect of disease mutations is more nuanced than increasing thermodynamic stability or increasing β-strand structure content. American Chemical Society 2023-01-13 /pmc/articles/PMC9881004/ /pubmed/36638831 http://dx.doi.org/10.1021/jacs.2c08596 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Wittmer, Yuuki
Jami, Khaled M.
Stowell, Rachelle K.
Le, Truc
Hung, Ivan
Murray, Dylan T.
Liquid Droplet Aging and Seeded Fibril Formation of the Cytotoxic Granule Associated RNA Binding Protein TIA1 Low Complexity Domain
title Liquid Droplet Aging and Seeded Fibril Formation of the Cytotoxic Granule Associated RNA Binding Protein TIA1 Low Complexity Domain
title_full Liquid Droplet Aging and Seeded Fibril Formation of the Cytotoxic Granule Associated RNA Binding Protein TIA1 Low Complexity Domain
title_fullStr Liquid Droplet Aging and Seeded Fibril Formation of the Cytotoxic Granule Associated RNA Binding Protein TIA1 Low Complexity Domain
title_full_unstemmed Liquid Droplet Aging and Seeded Fibril Formation of the Cytotoxic Granule Associated RNA Binding Protein TIA1 Low Complexity Domain
title_short Liquid Droplet Aging and Seeded Fibril Formation of the Cytotoxic Granule Associated RNA Binding Protein TIA1 Low Complexity Domain
title_sort liquid droplet aging and seeded fibril formation of the cytotoxic granule associated rna binding protein tia1 low complexity domain
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9881004/
https://www.ncbi.nlm.nih.gov/pubmed/36638831
http://dx.doi.org/10.1021/jacs.2c08596
work_keys_str_mv AT wittmeryuuki liquiddropletagingandseededfibrilformationofthecytotoxicgranuleassociatedrnabindingproteintia1lowcomplexitydomain
AT jamikhaledm liquiddropletagingandseededfibrilformationofthecytotoxicgranuleassociatedrnabindingproteintia1lowcomplexitydomain
AT stowellrachellek liquiddropletagingandseededfibrilformationofthecytotoxicgranuleassociatedrnabindingproteintia1lowcomplexitydomain
AT letruc liquiddropletagingandseededfibrilformationofthecytotoxicgranuleassociatedrnabindingproteintia1lowcomplexitydomain
AT hungivan liquiddropletagingandseededfibrilformationofthecytotoxicgranuleassociatedrnabindingproteintia1lowcomplexitydomain
AT murraydylant liquiddropletagingandseededfibrilformationofthecytotoxicgranuleassociatedrnabindingproteintia1lowcomplexitydomain