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Polyribosomes of circular topology are prevalent in mammalian cells
Polyribosomes, the groups of ribosomes simultaneously translating a single mRNA molecule, are very common in both, prokaryotic and eukaryotic cells. Even in early EM studies, polyribosomes have been shown to possess various spatial conformations, including a ring-shaped configuration which was consi...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9881139/ https://www.ncbi.nlm.nih.gov/pubmed/36583341 http://dx.doi.org/10.1093/nar/gkac1208 |
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author | Baymukhametov, Timur N Lyabin, Dmitry N Chesnokov, Yury M Sorokin, Ivan I Pechnikova, Evgeniya V Vasiliev, Alexander L Afonina, Zhanna A |
author_facet | Baymukhametov, Timur N Lyabin, Dmitry N Chesnokov, Yury M Sorokin, Ivan I Pechnikova, Evgeniya V Vasiliev, Alexander L Afonina, Zhanna A |
author_sort | Baymukhametov, Timur N |
collection | PubMed |
description | Polyribosomes, the groups of ribosomes simultaneously translating a single mRNA molecule, are very common in both, prokaryotic and eukaryotic cells. Even in early EM studies, polyribosomes have been shown to possess various spatial conformations, including a ring-shaped configuration which was considered to be functionally important. However, a recent in situ cryo-ET analysis of predominant regular inter-ribosome contacts did not confirm the abundance of ring-shaped polyribosomes in a cell cytoplasm. To address this discrepancy, here we analyzed the cryo-ET structure of polyribosomes in diluted lysates of HeLa cells. It was shown that the vast majority of the ribosomes were combined into polysomes and were proven to be translationally active. Tomogram analysis revealed that circular polyribosomes are indeed very common in the cytoplasm, but they mostly possess pseudo-regular structures without specific inter-ribosomal contacts. Although the size of polyribosomes varied widely, most circular polysomes were relatively small in size (4–8 ribosomes). Our results confirm the recent data that it is cellular mRNAs with short ORF that most commonly form circular structures providing an enhancement of translation. |
format | Online Article Text |
id | pubmed-9881139 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-98811392023-01-31 Polyribosomes of circular topology are prevalent in mammalian cells Baymukhametov, Timur N Lyabin, Dmitry N Chesnokov, Yury M Sorokin, Ivan I Pechnikova, Evgeniya V Vasiliev, Alexander L Afonina, Zhanna A Nucleic Acids Res Structural Biology Polyribosomes, the groups of ribosomes simultaneously translating a single mRNA molecule, are very common in both, prokaryotic and eukaryotic cells. Even in early EM studies, polyribosomes have been shown to possess various spatial conformations, including a ring-shaped configuration which was considered to be functionally important. However, a recent in situ cryo-ET analysis of predominant regular inter-ribosome contacts did not confirm the abundance of ring-shaped polyribosomes in a cell cytoplasm. To address this discrepancy, here we analyzed the cryo-ET structure of polyribosomes in diluted lysates of HeLa cells. It was shown that the vast majority of the ribosomes were combined into polysomes and were proven to be translationally active. Tomogram analysis revealed that circular polyribosomes are indeed very common in the cytoplasm, but they mostly possess pseudo-regular structures without specific inter-ribosomal contacts. Although the size of polyribosomes varied widely, most circular polysomes were relatively small in size (4–8 ribosomes). Our results confirm the recent data that it is cellular mRNAs with short ORF that most commonly form circular structures providing an enhancement of translation. Oxford University Press 2022-12-30 /pmc/articles/PMC9881139/ /pubmed/36583341 http://dx.doi.org/10.1093/nar/gkac1208 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Structural Biology Baymukhametov, Timur N Lyabin, Dmitry N Chesnokov, Yury M Sorokin, Ivan I Pechnikova, Evgeniya V Vasiliev, Alexander L Afonina, Zhanna A Polyribosomes of circular topology are prevalent in mammalian cells |
title | Polyribosomes of circular topology are prevalent in mammalian cells |
title_full | Polyribosomes of circular topology are prevalent in mammalian cells |
title_fullStr | Polyribosomes of circular topology are prevalent in mammalian cells |
title_full_unstemmed | Polyribosomes of circular topology are prevalent in mammalian cells |
title_short | Polyribosomes of circular topology are prevalent in mammalian cells |
title_sort | polyribosomes of circular topology are prevalent in mammalian cells |
topic | Structural Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9881139/ https://www.ncbi.nlm.nih.gov/pubmed/36583341 http://dx.doi.org/10.1093/nar/gkac1208 |
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