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Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer

Ovarian cancer (OC) is one of the deadliest cancers affecting the female reproductive system. It may present little or no symptoms at the early stages, and typically unspecific symptoms at later stages. High-grade serous ovarian cancer (HGSC) is the subtype responsible for most ovarian cancer deaths...

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Autores principales: Bifarin, Olatomiwa O., Sah, Samyukta, Gaul, David A., Moore, Samuel G., Chen, Ruihong, Palaniappan, Murugesan, Kim, Jaeyeon, Matzuk, Martin M., Fernández, Facundo M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9881992/
https://www.ncbi.nlm.nih.gov/pubmed/36711577
http://dx.doi.org/10.1101/2023.01.04.520434
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author Bifarin, Olatomiwa O.
Sah, Samyukta
Gaul, David A.
Moore, Samuel G.
Chen, Ruihong
Palaniappan, Murugesan
Kim, Jaeyeon
Matzuk, Martin M.
Fernández, Facundo M.
author_facet Bifarin, Olatomiwa O.
Sah, Samyukta
Gaul, David A.
Moore, Samuel G.
Chen, Ruihong
Palaniappan, Murugesan
Kim, Jaeyeon
Matzuk, Martin M.
Fernández, Facundo M.
author_sort Bifarin, Olatomiwa O.
collection PubMed
description Ovarian cancer (OC) is one of the deadliest cancers affecting the female reproductive system. It may present little or no symptoms at the early stages, and typically unspecific symptoms at later stages. High-grade serous ovarian cancer (HGSC) is the subtype responsible for most ovarian cancer deaths. However, very little is known about the metabolic course of this disease, particularly in its early stages. In this longitudinal study, we examined the temporal course of serum lipidome changes using a robust HGSC mouse model and machine learning data analysis. Early progression of HGSC was marked by increased levels of phosphatidylcholines and phosphatidylethanolamines. In contrast, later stages featured more diverse lipids alterations, including fatty acids and their derivatives, triglycerides, ceramides, hexosylceramides, sphingomyelins, lysophosphatidylcholines, and phosphatidylinositols. These alterations underscored unique perturbations in cell membrane stability, proliferation, and survival during cancer development and progression, offering potential targets for early detection and prognosis of human ovarian cancer.
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spelling pubmed-98819922023-01-28 Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer Bifarin, Olatomiwa O. Sah, Samyukta Gaul, David A. Moore, Samuel G. Chen, Ruihong Palaniappan, Murugesan Kim, Jaeyeon Matzuk, Martin M. Fernández, Facundo M. bioRxiv Article Ovarian cancer (OC) is one of the deadliest cancers affecting the female reproductive system. It may present little or no symptoms at the early stages, and typically unspecific symptoms at later stages. High-grade serous ovarian cancer (HGSC) is the subtype responsible for most ovarian cancer deaths. However, very little is known about the metabolic course of this disease, particularly in its early stages. In this longitudinal study, we examined the temporal course of serum lipidome changes using a robust HGSC mouse model and machine learning data analysis. Early progression of HGSC was marked by increased levels of phosphatidylcholines and phosphatidylethanolamines. In contrast, later stages featured more diverse lipids alterations, including fatty acids and their derivatives, triglycerides, ceramides, hexosylceramides, sphingomyelins, lysophosphatidylcholines, and phosphatidylinositols. These alterations underscored unique perturbations in cell membrane stability, proliferation, and survival during cancer development and progression, offering potential targets for early detection and prognosis of human ovarian cancer. Cold Spring Harbor Laboratory 2023-01-04 /pmc/articles/PMC9881992/ /pubmed/36711577 http://dx.doi.org/10.1101/2023.01.04.520434 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Bifarin, Olatomiwa O.
Sah, Samyukta
Gaul, David A.
Moore, Samuel G.
Chen, Ruihong
Palaniappan, Murugesan
Kim, Jaeyeon
Matzuk, Martin M.
Fernández, Facundo M.
Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer
title Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer
title_full Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer
title_fullStr Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer
title_full_unstemmed Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer
title_short Machine Learning Reveals Lipidome Remodeling Dynamics in a Mouse Model of Ovarian Cancer
title_sort machine learning reveals lipidome remodeling dynamics in a mouse model of ovarian cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9881992/
https://www.ncbi.nlm.nih.gov/pubmed/36711577
http://dx.doi.org/10.1101/2023.01.04.520434
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