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Caffeine-tolerant mutations selected through an at-home yeast experimental evolution teaching lab

yEvo is a curriculum for high school students centered around evolution experiments in S. cerevisiae. To adapt the curriculum for remote instruction, we created a new protocol to evolve non-GMO yeast in the presence of caffeine. Evolved strains had increased caffeine tolerance and distinct colony mo...

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Autores principales: Moresi, Naomi G., Geck, Renee C., Skophammer, Ryan, Godin, Dennis, Taylor, M. Bryce, Dunham, Maitreya J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9882195/
https://www.ncbi.nlm.nih.gov/pubmed/36712001
http://dx.doi.org/10.1101/2023.01.17.524437
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author Moresi, Naomi G.
Geck, Renee C.
Skophammer, Ryan
Godin, Dennis
Taylor, M. Bryce
Dunham, Maitreya J.
author_facet Moresi, Naomi G.
Geck, Renee C.
Skophammer, Ryan
Godin, Dennis
Taylor, M. Bryce
Dunham, Maitreya J.
author_sort Moresi, Naomi G.
collection PubMed
description yEvo is a curriculum for high school students centered around evolution experiments in S. cerevisiae. To adapt the curriculum for remote instruction, we created a new protocol to evolve non-GMO yeast in the presence of caffeine. Evolved strains had increased caffeine tolerance and distinct colony morphologies. Many possessed copy number variations, transposon insertions, and mutations affecting genes with known relationships to caffeine and TOR signaling - which is inhibited by caffeine - and in other genes not previously connected with caffeine. This demonstrates that our accessible, at-home protocol is sufficient to permit novel insights into caffeine tolerance.
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spelling pubmed-98821952023-01-28 Caffeine-tolerant mutations selected through an at-home yeast experimental evolution teaching lab Moresi, Naomi G. Geck, Renee C. Skophammer, Ryan Godin, Dennis Taylor, M. Bryce Dunham, Maitreya J. bioRxiv Article yEvo is a curriculum for high school students centered around evolution experiments in S. cerevisiae. To adapt the curriculum for remote instruction, we created a new protocol to evolve non-GMO yeast in the presence of caffeine. Evolved strains had increased caffeine tolerance and distinct colony morphologies. Many possessed copy number variations, transposon insertions, and mutations affecting genes with known relationships to caffeine and TOR signaling - which is inhibited by caffeine - and in other genes not previously connected with caffeine. This demonstrates that our accessible, at-home protocol is sufficient to permit novel insights into caffeine tolerance. Cold Spring Harbor Laboratory 2023-01-20 /pmc/articles/PMC9882195/ /pubmed/36712001 http://dx.doi.org/10.1101/2023.01.17.524437 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Moresi, Naomi G.
Geck, Renee C.
Skophammer, Ryan
Godin, Dennis
Taylor, M. Bryce
Dunham, Maitreya J.
Caffeine-tolerant mutations selected through an at-home yeast experimental evolution teaching lab
title Caffeine-tolerant mutations selected through an at-home yeast experimental evolution teaching lab
title_full Caffeine-tolerant mutations selected through an at-home yeast experimental evolution teaching lab
title_fullStr Caffeine-tolerant mutations selected through an at-home yeast experimental evolution teaching lab
title_full_unstemmed Caffeine-tolerant mutations selected through an at-home yeast experimental evolution teaching lab
title_short Caffeine-tolerant mutations selected through an at-home yeast experimental evolution teaching lab
title_sort caffeine-tolerant mutations selected through an at-home yeast experimental evolution teaching lab
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9882195/
https://www.ncbi.nlm.nih.gov/pubmed/36712001
http://dx.doi.org/10.1101/2023.01.17.524437
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