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Heterogeneity in the M. tuberculosis β-Lactamase Inhibition by Sulbactam
For decades, researchers have been determined to elucidate essential enzymatic functions on the atomic lengths scale by tracing atomic positions in real time. Our work builds on new possibilities unleashed by mix-and-inject serial crystallography (MISC) (1–5) at X-ray free electron laser facilities....
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Journal Experts
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9882615/ https://www.ncbi.nlm.nih.gov/pubmed/36712138 http://dx.doi.org/10.21203/rs.3.rs-2334665/v1 |
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author | Schmidt, Marius Malla, Tek Narsingh Zielinski, Kara Aldama, Luis Bajt, Sasa Feliz, Denisse Hayes, Brandon Hunter, Mark Kupitz, Christopher Lisova, Stella Knoska, Juraj Martin-Garcia, Jose Mariani, Valerio Pandey, Suraj Poudyal, Ishwor Sierra, Raymond Tolstikova, Alexandra Yefanov, Oleksandr Yoon, Ching Hong Ourmazd, Abbas Fromme, Petra Schwander, Peter Barty, Anton Chapman, Henry Stojković, Emina Batyuk, Alexander Boutet, Sébastien Phillips, George Pollack, Lois |
author_facet | Schmidt, Marius Malla, Tek Narsingh Zielinski, Kara Aldama, Luis Bajt, Sasa Feliz, Denisse Hayes, Brandon Hunter, Mark Kupitz, Christopher Lisova, Stella Knoska, Juraj Martin-Garcia, Jose Mariani, Valerio Pandey, Suraj Poudyal, Ishwor Sierra, Raymond Tolstikova, Alexandra Yefanov, Oleksandr Yoon, Ching Hong Ourmazd, Abbas Fromme, Petra Schwander, Peter Barty, Anton Chapman, Henry Stojković, Emina Batyuk, Alexander Boutet, Sébastien Phillips, George Pollack, Lois |
author_sort | Schmidt, Marius |
collection | PubMed |
description | For decades, researchers have been determined to elucidate essential enzymatic functions on the atomic lengths scale by tracing atomic positions in real time. Our work builds on new possibilities unleashed by mix-and-inject serial crystallography (MISC) (1–5) at X-ray free electron laser facilities. In this approach, enzymatic reactions are triggered by mixing substrate or ligand solutions with enzyme microcrystals (6). Here, we report in atomic detail and with millisecond time-resolution how the Mycobacterium tuberculosis enzyme BlaC is inhibited by sulbactam (SUB). Our results reveal ligand binding heterogeneity, ligand gating (7–9), cooperativity, induced fit (10,11) and conformational selection (11–13) all from the same set of MISC data, detailing how SUB approaches the catalytic clefts and binds to the enzyme non-covalently before reacting to a trans-enamine. This was made possible in part by the application of the singular value decomposition (14) to the MISC data using a newly developed program that remains functional even if unit cell parameters change during the reaction. |
format | Online Article Text |
id | pubmed-9882615 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Journal Experts |
record_format | MEDLINE/PubMed |
spelling | pubmed-98826152023-01-28 Heterogeneity in the M. tuberculosis β-Lactamase Inhibition by Sulbactam Schmidt, Marius Malla, Tek Narsingh Zielinski, Kara Aldama, Luis Bajt, Sasa Feliz, Denisse Hayes, Brandon Hunter, Mark Kupitz, Christopher Lisova, Stella Knoska, Juraj Martin-Garcia, Jose Mariani, Valerio Pandey, Suraj Poudyal, Ishwor Sierra, Raymond Tolstikova, Alexandra Yefanov, Oleksandr Yoon, Ching Hong Ourmazd, Abbas Fromme, Petra Schwander, Peter Barty, Anton Chapman, Henry Stojković, Emina Batyuk, Alexander Boutet, Sébastien Phillips, George Pollack, Lois Res Sq Article For decades, researchers have been determined to elucidate essential enzymatic functions on the atomic lengths scale by tracing atomic positions in real time. Our work builds on new possibilities unleashed by mix-and-inject serial crystallography (MISC) (1–5) at X-ray free electron laser facilities. In this approach, enzymatic reactions are triggered by mixing substrate or ligand solutions with enzyme microcrystals (6). Here, we report in atomic detail and with millisecond time-resolution how the Mycobacterium tuberculosis enzyme BlaC is inhibited by sulbactam (SUB). Our results reveal ligand binding heterogeneity, ligand gating (7–9), cooperativity, induced fit (10,11) and conformational selection (11–13) all from the same set of MISC data, detailing how SUB approaches the catalytic clefts and binds to the enzyme non-covalently before reacting to a trans-enamine. This was made possible in part by the application of the singular value decomposition (14) to the MISC data using a newly developed program that remains functional even if unit cell parameters change during the reaction. American Journal Experts 2023-01-10 /pmc/articles/PMC9882615/ /pubmed/36712138 http://dx.doi.org/10.21203/rs.3.rs-2334665/v1 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use. |
spellingShingle | Article Schmidt, Marius Malla, Tek Narsingh Zielinski, Kara Aldama, Luis Bajt, Sasa Feliz, Denisse Hayes, Brandon Hunter, Mark Kupitz, Christopher Lisova, Stella Knoska, Juraj Martin-Garcia, Jose Mariani, Valerio Pandey, Suraj Poudyal, Ishwor Sierra, Raymond Tolstikova, Alexandra Yefanov, Oleksandr Yoon, Ching Hong Ourmazd, Abbas Fromme, Petra Schwander, Peter Barty, Anton Chapman, Henry Stojković, Emina Batyuk, Alexander Boutet, Sébastien Phillips, George Pollack, Lois Heterogeneity in the M. tuberculosis β-Lactamase Inhibition by Sulbactam |
title | Heterogeneity in the M. tuberculosis β-Lactamase Inhibition by Sulbactam |
title_full | Heterogeneity in the M. tuberculosis β-Lactamase Inhibition by Sulbactam |
title_fullStr | Heterogeneity in the M. tuberculosis β-Lactamase Inhibition by Sulbactam |
title_full_unstemmed | Heterogeneity in the M. tuberculosis β-Lactamase Inhibition by Sulbactam |
title_short | Heterogeneity in the M. tuberculosis β-Lactamase Inhibition by Sulbactam |
title_sort | heterogeneity in the m. tuberculosis β-lactamase inhibition by sulbactam |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9882615/ https://www.ncbi.nlm.nih.gov/pubmed/36712138 http://dx.doi.org/10.21203/rs.3.rs-2334665/v1 |
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