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Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer

BACKGROUND: Ribonucleotide reductase (RR) consists of two subunits, the large subunit RRM1 and the small subunit (RRM2 or RRM2B), which is essential for DNA replication. Dysregulations of RR were implicated in multiple types of cancer. However, the abnormal expressions and biologic functions of RR s...

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Autores principales: Yin, Xin, Jiang, Kan, Zhou, Ziyang, Yu, Hao, Yan, Danfang, He, Xingkang, Yan, Senxiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9883104/
https://www.ncbi.nlm.nih.gov/pubmed/36713030
http://dx.doi.org/10.1155/2023/3878796
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author Yin, Xin
Jiang, Kan
Zhou, Ziyang
Yu, Hao
Yan, Danfang
He, Xingkang
Yan, Senxiang
author_facet Yin, Xin
Jiang, Kan
Zhou, Ziyang
Yu, Hao
Yan, Danfang
He, Xingkang
Yan, Senxiang
author_sort Yin, Xin
collection PubMed
description BACKGROUND: Ribonucleotide reductase (RR) consists of two subunits, the large subunit RRM1 and the small subunit (RRM2 or RRM2B), which is essential for DNA replication. Dysregulations of RR were implicated in multiple types of cancer. However, the abnormal expressions and biologic functions of RR subunits in liver cancer remain to be elucidated. METHODS: TCGA, HCCDB, CCLE, HPA, cBioPortal, and GeneMANIA were utilized to perform bioinformatics analysis of RR subunits in the liver cancer. GO, KEGG, and GSEA were used for enrichment analysis. RESULTS: The expressions of RRM1, RRM2, and RRM2B were remarkably upregulated among liver cancer tissue both in mRNA and protein levels. High expression of RRM1 and RRM2 was notably associated with high tumor grade, high stage, short overall survival, and disease-specific survival. Enrichment analyses indicated that RRM1 and RRM2 were related to DNA replication, cell cycle, regulation of nuclear division, DNA repair, and DNA recombination. Correlation analysis indicated that RRM1 and RRM2 were significantly associated with several subsets of immune cell, including Th2 cells, cytotoxic cells, and neutrophils. RRM2B expression was positively associated with immune score and stromal score. Chemosensitivity analysis revealed that sensitivity of nelarabine was positively associated with high expressions of RRM1 and RRM2. The sensitivity of rapamycin was positively associated with high expressions of RRM2B. CONCLUSION: Our findings demonstrated high expression profiles of RR subunits in liver cancer, which may provide novel insights for predicting the poor prognosis and increased chemosensitivity of liver cancer in clinic.
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spelling pubmed-98831042023-01-28 Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer Yin, Xin Jiang, Kan Zhou, Ziyang Yu, Hao Yan, Danfang He, Xingkang Yan, Senxiang Oxid Med Cell Longev Research Article BACKGROUND: Ribonucleotide reductase (RR) consists of two subunits, the large subunit RRM1 and the small subunit (RRM2 or RRM2B), which is essential for DNA replication. Dysregulations of RR were implicated in multiple types of cancer. However, the abnormal expressions and biologic functions of RR subunits in liver cancer remain to be elucidated. METHODS: TCGA, HCCDB, CCLE, HPA, cBioPortal, and GeneMANIA were utilized to perform bioinformatics analysis of RR subunits in the liver cancer. GO, KEGG, and GSEA were used for enrichment analysis. RESULTS: The expressions of RRM1, RRM2, and RRM2B were remarkably upregulated among liver cancer tissue both in mRNA and protein levels. High expression of RRM1 and RRM2 was notably associated with high tumor grade, high stage, short overall survival, and disease-specific survival. Enrichment analyses indicated that RRM1 and RRM2 were related to DNA replication, cell cycle, regulation of nuclear division, DNA repair, and DNA recombination. Correlation analysis indicated that RRM1 and RRM2 were significantly associated with several subsets of immune cell, including Th2 cells, cytotoxic cells, and neutrophils. RRM2B expression was positively associated with immune score and stromal score. Chemosensitivity analysis revealed that sensitivity of nelarabine was positively associated with high expressions of RRM1 and RRM2. The sensitivity of rapamycin was positively associated with high expressions of RRM2B. CONCLUSION: Our findings demonstrated high expression profiles of RR subunits in liver cancer, which may provide novel insights for predicting the poor prognosis and increased chemosensitivity of liver cancer in clinic. Hindawi 2023-01-20 /pmc/articles/PMC9883104/ /pubmed/36713030 http://dx.doi.org/10.1155/2023/3878796 Text en Copyright © 2023 Xin Yin et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Yin, Xin
Jiang, Kan
Zhou, Ziyang
Yu, Hao
Yan, Danfang
He, Xingkang
Yan, Senxiang
Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer
title Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer
title_full Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer
title_fullStr Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer
title_full_unstemmed Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer
title_short Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer
title_sort prognostic and immunological potential of ribonucleotide reductase subunits in liver cancer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9883104/
https://www.ncbi.nlm.nih.gov/pubmed/36713030
http://dx.doi.org/10.1155/2023/3878796
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