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Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer
BACKGROUND: Ribonucleotide reductase (RR) consists of two subunits, the large subunit RRM1 and the small subunit (RRM2 or RRM2B), which is essential for DNA replication. Dysregulations of RR were implicated in multiple types of cancer. However, the abnormal expressions and biologic functions of RR s...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9883104/ https://www.ncbi.nlm.nih.gov/pubmed/36713030 http://dx.doi.org/10.1155/2023/3878796 |
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author | Yin, Xin Jiang, Kan Zhou, Ziyang Yu, Hao Yan, Danfang He, Xingkang Yan, Senxiang |
author_facet | Yin, Xin Jiang, Kan Zhou, Ziyang Yu, Hao Yan, Danfang He, Xingkang Yan, Senxiang |
author_sort | Yin, Xin |
collection | PubMed |
description | BACKGROUND: Ribonucleotide reductase (RR) consists of two subunits, the large subunit RRM1 and the small subunit (RRM2 or RRM2B), which is essential for DNA replication. Dysregulations of RR were implicated in multiple types of cancer. However, the abnormal expressions and biologic functions of RR subunits in liver cancer remain to be elucidated. METHODS: TCGA, HCCDB, CCLE, HPA, cBioPortal, and GeneMANIA were utilized to perform bioinformatics analysis of RR subunits in the liver cancer. GO, KEGG, and GSEA were used for enrichment analysis. RESULTS: The expressions of RRM1, RRM2, and RRM2B were remarkably upregulated among liver cancer tissue both in mRNA and protein levels. High expression of RRM1 and RRM2 was notably associated with high tumor grade, high stage, short overall survival, and disease-specific survival. Enrichment analyses indicated that RRM1 and RRM2 were related to DNA replication, cell cycle, regulation of nuclear division, DNA repair, and DNA recombination. Correlation analysis indicated that RRM1 and RRM2 were significantly associated with several subsets of immune cell, including Th2 cells, cytotoxic cells, and neutrophils. RRM2B expression was positively associated with immune score and stromal score. Chemosensitivity analysis revealed that sensitivity of nelarabine was positively associated with high expressions of RRM1 and RRM2. The sensitivity of rapamycin was positively associated with high expressions of RRM2B. CONCLUSION: Our findings demonstrated high expression profiles of RR subunits in liver cancer, which may provide novel insights for predicting the poor prognosis and increased chemosensitivity of liver cancer in clinic. |
format | Online Article Text |
id | pubmed-9883104 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-98831042023-01-28 Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer Yin, Xin Jiang, Kan Zhou, Ziyang Yu, Hao Yan, Danfang He, Xingkang Yan, Senxiang Oxid Med Cell Longev Research Article BACKGROUND: Ribonucleotide reductase (RR) consists of two subunits, the large subunit RRM1 and the small subunit (RRM2 or RRM2B), which is essential for DNA replication. Dysregulations of RR were implicated in multiple types of cancer. However, the abnormal expressions and biologic functions of RR subunits in liver cancer remain to be elucidated. METHODS: TCGA, HCCDB, CCLE, HPA, cBioPortal, and GeneMANIA were utilized to perform bioinformatics analysis of RR subunits in the liver cancer. GO, KEGG, and GSEA were used for enrichment analysis. RESULTS: The expressions of RRM1, RRM2, and RRM2B were remarkably upregulated among liver cancer tissue both in mRNA and protein levels. High expression of RRM1 and RRM2 was notably associated with high tumor grade, high stage, short overall survival, and disease-specific survival. Enrichment analyses indicated that RRM1 and RRM2 were related to DNA replication, cell cycle, regulation of nuclear division, DNA repair, and DNA recombination. Correlation analysis indicated that RRM1 and RRM2 were significantly associated with several subsets of immune cell, including Th2 cells, cytotoxic cells, and neutrophils. RRM2B expression was positively associated with immune score and stromal score. Chemosensitivity analysis revealed that sensitivity of nelarabine was positively associated with high expressions of RRM1 and RRM2. The sensitivity of rapamycin was positively associated with high expressions of RRM2B. CONCLUSION: Our findings demonstrated high expression profiles of RR subunits in liver cancer, which may provide novel insights for predicting the poor prognosis and increased chemosensitivity of liver cancer in clinic. Hindawi 2023-01-20 /pmc/articles/PMC9883104/ /pubmed/36713030 http://dx.doi.org/10.1155/2023/3878796 Text en Copyright © 2023 Xin Yin et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Yin, Xin Jiang, Kan Zhou, Ziyang Yu, Hao Yan, Danfang He, Xingkang Yan, Senxiang Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer |
title | Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer |
title_full | Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer |
title_fullStr | Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer |
title_full_unstemmed | Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer |
title_short | Prognostic and Immunological Potential of Ribonucleotide Reductase Subunits in Liver Cancer |
title_sort | prognostic and immunological potential of ribonucleotide reductase subunits in liver cancer |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9883104/ https://www.ncbi.nlm.nih.gov/pubmed/36713030 http://dx.doi.org/10.1155/2023/3878796 |
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