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Association between mutational subgroups, Warburg‐subtypes, and survival in patients with colorectal cancer

BACKGROUND: Previous research suggests that Warburg‐subtypes are related to potentially important survival differences in colorectal cancer (CRC) patients. In the present study, we investigated whether mutational subgroups based on somatic mutations in RAS, BRAF, PIK3CA, and MET, which are known to...

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Autores principales: Offermans, Kelly, Jenniskens, Josien C. A., Simons, Colinda C. J. M., Samarska, Iryna, Fazzi, Gregorio E., van der Meer, Jaleesa R. M., Smits, Kim M., Schouten, Leo J., Weijenberg, Matty P., Grabsch, Heike I., van den Brandt, Piet A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9883416/
https://www.ncbi.nlm.nih.gov/pubmed/35785488
http://dx.doi.org/10.1002/cam4.4968
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author Offermans, Kelly
Jenniskens, Josien C. A.
Simons, Colinda C. J. M.
Samarska, Iryna
Fazzi, Gregorio E.
van der Meer, Jaleesa R. M.
Smits, Kim M.
Schouten, Leo J.
Weijenberg, Matty P.
Grabsch, Heike I.
van den Brandt, Piet A.
author_facet Offermans, Kelly
Jenniskens, Josien C. A.
Simons, Colinda C. J. M.
Samarska, Iryna
Fazzi, Gregorio E.
van der Meer, Jaleesa R. M.
Smits, Kim M.
Schouten, Leo J.
Weijenberg, Matty P.
Grabsch, Heike I.
van den Brandt, Piet A.
author_sort Offermans, Kelly
collection PubMed
description BACKGROUND: Previous research suggests that Warburg‐subtypes are related to potentially important survival differences in colorectal cancer (CRC) patients. In the present study, we investigated whether mutational subgroups based on somatic mutations in RAS, BRAF, PIK3CA, and MET, which are known to promote the Warburg‐effect, as well as mismatch repair (MMR) status, hold prognostic value in CRC. In addition, we investigated whether Warburg‐subtypes provide additional prognostic information, independent of known prognostic factors like TNM stage. METHODS: CRC patients (n = 2344) from the prospective Netherlands Cohort Study (NLCS) were classified into eight mutually exclusive mutational subgroups, based on observed mutations in RAS, BRAF, PIK3CA, and MET, and MMR status: All‐wild‐type + MMR(proficient), KRAS ( mut ) + MMR(proficient), KRAS ( mut ) + PIK3CA ( mut ) + MMR(proficient), PIK3CA ( mut ) + MMR(proficient), BRAF ( mut ) + MMR(proficient), BRAF ( mut ) + MMR(deficient), other + MMR(proficient), and other + MMR(deficient). Kaplan–Meier curves and Cox regression models were used to investigate associations between mutational subgroups and survival, as well as associations between our previously established Warburg‐subtypes and survival within these mutational subgroups. RESULTS: Compared to patients with all‐wild‐type + MMR(proficient) CRC, patients with KRAS (mut) + MMR(proficient), KRAS ( mut ) + PIK3CA ( mut ) + MMR(proficient), BRAF ( mut ) + MMR(proficient), or other + MMR(proficient) CRC had a statistically significant worse survival (HR(CRC‐specific) ranged from 1.29 to 1.88). In contrast, patients with other + MMR(deficient) CRC had the most favorable survival (HR(CRC‐specific) 0.48). No statistically significant survival differences were observed for the Warburg‐subtypes within mutational subgroups. CONCLUSION: Our results highlight the prognostic potential of mutational subgroups in CRC. Warburg‐subtypes did not provide additional prognostic information within these mutational subgroups. Future larger‐scale prospective studies are necessary to validate our findings and to examine the potential clinical utility of CRC subtyping based on mutational subgroups.
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spelling pubmed-98834162023-01-30 Association between mutational subgroups, Warburg‐subtypes, and survival in patients with colorectal cancer Offermans, Kelly Jenniskens, Josien C. A. Simons, Colinda C. J. M. Samarska, Iryna Fazzi, Gregorio E. van der Meer, Jaleesa R. M. Smits, Kim M. Schouten, Leo J. Weijenberg, Matty P. Grabsch, Heike I. van den Brandt, Piet A. Cancer Med RESEARCH ARTICLES BACKGROUND: Previous research suggests that Warburg‐subtypes are related to potentially important survival differences in colorectal cancer (CRC) patients. In the present study, we investigated whether mutational subgroups based on somatic mutations in RAS, BRAF, PIK3CA, and MET, which are known to promote the Warburg‐effect, as well as mismatch repair (MMR) status, hold prognostic value in CRC. In addition, we investigated whether Warburg‐subtypes provide additional prognostic information, independent of known prognostic factors like TNM stage. METHODS: CRC patients (n = 2344) from the prospective Netherlands Cohort Study (NLCS) were classified into eight mutually exclusive mutational subgroups, based on observed mutations in RAS, BRAF, PIK3CA, and MET, and MMR status: All‐wild‐type + MMR(proficient), KRAS ( mut ) + MMR(proficient), KRAS ( mut ) + PIK3CA ( mut ) + MMR(proficient), PIK3CA ( mut ) + MMR(proficient), BRAF ( mut ) + MMR(proficient), BRAF ( mut ) + MMR(deficient), other + MMR(proficient), and other + MMR(deficient). Kaplan–Meier curves and Cox regression models were used to investigate associations between mutational subgroups and survival, as well as associations between our previously established Warburg‐subtypes and survival within these mutational subgroups. RESULTS: Compared to patients with all‐wild‐type + MMR(proficient) CRC, patients with KRAS (mut) + MMR(proficient), KRAS ( mut ) + PIK3CA ( mut ) + MMR(proficient), BRAF ( mut ) + MMR(proficient), or other + MMR(proficient) CRC had a statistically significant worse survival (HR(CRC‐specific) ranged from 1.29 to 1.88). In contrast, patients with other + MMR(deficient) CRC had the most favorable survival (HR(CRC‐specific) 0.48). No statistically significant survival differences were observed for the Warburg‐subtypes within mutational subgroups. CONCLUSION: Our results highlight the prognostic potential of mutational subgroups in CRC. Warburg‐subtypes did not provide additional prognostic information within these mutational subgroups. Future larger‐scale prospective studies are necessary to validate our findings and to examine the potential clinical utility of CRC subtyping based on mutational subgroups. John Wiley and Sons Inc. 2022-07-03 /pmc/articles/PMC9883416/ /pubmed/35785488 http://dx.doi.org/10.1002/cam4.4968 Text en © 2022 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle RESEARCH ARTICLES
Offermans, Kelly
Jenniskens, Josien C. A.
Simons, Colinda C. J. M.
Samarska, Iryna
Fazzi, Gregorio E.
van der Meer, Jaleesa R. M.
Smits, Kim M.
Schouten, Leo J.
Weijenberg, Matty P.
Grabsch, Heike I.
van den Brandt, Piet A.
Association between mutational subgroups, Warburg‐subtypes, and survival in patients with colorectal cancer
title Association between mutational subgroups, Warburg‐subtypes, and survival in patients with colorectal cancer
title_full Association between mutational subgroups, Warburg‐subtypes, and survival in patients with colorectal cancer
title_fullStr Association between mutational subgroups, Warburg‐subtypes, and survival in patients with colorectal cancer
title_full_unstemmed Association between mutational subgroups, Warburg‐subtypes, and survival in patients with colorectal cancer
title_short Association between mutational subgroups, Warburg‐subtypes, and survival in patients with colorectal cancer
title_sort association between mutational subgroups, warburg‐subtypes, and survival in patients with colorectal cancer
topic RESEARCH ARTICLES
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9883416/
https://www.ncbi.nlm.nih.gov/pubmed/35785488
http://dx.doi.org/10.1002/cam4.4968
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