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Apparent diameter and cell density of yeast strains with different ploidy
Optical density at 600 nm (OD(600)) measurements are routinely and quickly taken to estimate cell density in cultivation and to track cell growth. The yeast Saccharomyces cerevisiae is one of the microorganisms most used in industry, and the OD(600) values are frequently adopted as the indicator of...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9883461/ https://www.ncbi.nlm.nih.gov/pubmed/36707648 http://dx.doi.org/10.1038/s41598-023-28800-z |
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author | Fukuda, Nobuo |
author_facet | Fukuda, Nobuo |
author_sort | Fukuda, Nobuo |
collection | PubMed |
description | Optical density at 600 nm (OD(600)) measurements are routinely and quickly taken to estimate cell density in cultivation and to track cell growth. The yeast Saccharomyces cerevisiae is one of the microorganisms most used in industry, and the OD(600) values are frequently adopted as the indicator of yeast cell density, according to the Beer–Lambert law. Because the OD(600) value is based on turbidity measurement, the Beer–Lambert law can be applied only for microbial cultivation with low cell densities. The proportionality constants strongly depend on several parameters such as cell size. Typically, yeast strains are categorized into haploids and diploids. It is well known that cell size of diploid yeasts is larger than haploid cells. Additionally, polyploid (especially triploid and tetraploid) yeast cells are also employed in several human-activities such as bread-making and lager-brewing. As a matter of fact, there is almost no attention paid to the difference in the proportionality constants depending on the yeast ploidy. This study presents information for cell size of haploid, diploid, triploid, and tetraploid yeasts with isogenic background, and describes their proportionality constants (k) corresponding to the molar extinction coefficient (ε) in the Beer–Lambert law. Importantly, it was found that the constants are inversely proportional to apparent cell diameters estimated by flow cytometric analysis. Although each cell property highly depends on genetic and environmental factors, a set of results obtained from yeast strains with different ploidy in the current study would serve as a major reference source for researchers and technical experts. |
format | Online Article Text |
id | pubmed-9883461 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-98834612023-01-29 Apparent diameter and cell density of yeast strains with different ploidy Fukuda, Nobuo Sci Rep Article Optical density at 600 nm (OD(600)) measurements are routinely and quickly taken to estimate cell density in cultivation and to track cell growth. The yeast Saccharomyces cerevisiae is one of the microorganisms most used in industry, and the OD(600) values are frequently adopted as the indicator of yeast cell density, according to the Beer–Lambert law. Because the OD(600) value is based on turbidity measurement, the Beer–Lambert law can be applied only for microbial cultivation with low cell densities. The proportionality constants strongly depend on several parameters such as cell size. Typically, yeast strains are categorized into haploids and diploids. It is well known that cell size of diploid yeasts is larger than haploid cells. Additionally, polyploid (especially triploid and tetraploid) yeast cells are also employed in several human-activities such as bread-making and lager-brewing. As a matter of fact, there is almost no attention paid to the difference in the proportionality constants depending on the yeast ploidy. This study presents information for cell size of haploid, diploid, triploid, and tetraploid yeasts with isogenic background, and describes their proportionality constants (k) corresponding to the molar extinction coefficient (ε) in the Beer–Lambert law. Importantly, it was found that the constants are inversely proportional to apparent cell diameters estimated by flow cytometric analysis. Although each cell property highly depends on genetic and environmental factors, a set of results obtained from yeast strains with different ploidy in the current study would serve as a major reference source for researchers and technical experts. Nature Publishing Group UK 2023-01-27 /pmc/articles/PMC9883461/ /pubmed/36707648 http://dx.doi.org/10.1038/s41598-023-28800-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Fukuda, Nobuo Apparent diameter and cell density of yeast strains with different ploidy |
title | Apparent diameter and cell density of yeast strains with different ploidy |
title_full | Apparent diameter and cell density of yeast strains with different ploidy |
title_fullStr | Apparent diameter and cell density of yeast strains with different ploidy |
title_full_unstemmed | Apparent diameter and cell density of yeast strains with different ploidy |
title_short | Apparent diameter and cell density of yeast strains with different ploidy |
title_sort | apparent diameter and cell density of yeast strains with different ploidy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9883461/ https://www.ncbi.nlm.nih.gov/pubmed/36707648 http://dx.doi.org/10.1038/s41598-023-28800-z |
work_keys_str_mv | AT fukudanobuo apparentdiameterandcelldensityofyeaststrainswithdifferentploidy |