Cargando…

Apparent diameter and cell density of yeast strains with different ploidy

Optical density at 600 nm (OD(600)) measurements are routinely and quickly taken to estimate cell density in cultivation and to track cell growth. The yeast Saccharomyces cerevisiae is one of the microorganisms most used in industry, and the OD(600) values are frequently adopted as the indicator of...

Descripción completa

Detalles Bibliográficos
Autor principal: Fukuda, Nobuo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9883461/
https://www.ncbi.nlm.nih.gov/pubmed/36707648
http://dx.doi.org/10.1038/s41598-023-28800-z
_version_ 1784879513101926400
author Fukuda, Nobuo
author_facet Fukuda, Nobuo
author_sort Fukuda, Nobuo
collection PubMed
description Optical density at 600 nm (OD(600)) measurements are routinely and quickly taken to estimate cell density in cultivation and to track cell growth. The yeast Saccharomyces cerevisiae is one of the microorganisms most used in industry, and the OD(600) values are frequently adopted as the indicator of yeast cell density, according to the Beer–Lambert law. Because the OD(600) value is based on turbidity measurement, the Beer–Lambert law can be applied only for microbial cultivation with low cell densities. The proportionality constants strongly depend on several parameters such as cell size. Typically, yeast strains are categorized into haploids and diploids. It is well known that cell size of diploid yeasts is larger than haploid cells. Additionally, polyploid (especially triploid and tetraploid) yeast cells are also employed in several human-activities such as bread-making and lager-brewing. As a matter of fact, there is almost no attention paid to the difference in the proportionality constants depending on the yeast ploidy. This study presents information for cell size of haploid, diploid, triploid, and tetraploid yeasts with isogenic background, and describes their proportionality constants (k) corresponding to the molar extinction coefficient (ε) in the Beer–Lambert law. Importantly, it was found that the constants are inversely proportional to apparent cell diameters estimated by flow cytometric analysis. Although each cell property highly depends on genetic and environmental factors, a set of results obtained from yeast strains with different ploidy in the current study would serve as a major reference source for researchers and technical experts.
format Online
Article
Text
id pubmed-9883461
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-98834612023-01-29 Apparent diameter and cell density of yeast strains with different ploidy Fukuda, Nobuo Sci Rep Article Optical density at 600 nm (OD(600)) measurements are routinely and quickly taken to estimate cell density in cultivation and to track cell growth. The yeast Saccharomyces cerevisiae is one of the microorganisms most used in industry, and the OD(600) values are frequently adopted as the indicator of yeast cell density, according to the Beer–Lambert law. Because the OD(600) value is based on turbidity measurement, the Beer–Lambert law can be applied only for microbial cultivation with low cell densities. The proportionality constants strongly depend on several parameters such as cell size. Typically, yeast strains are categorized into haploids and diploids. It is well known that cell size of diploid yeasts is larger than haploid cells. Additionally, polyploid (especially triploid and tetraploid) yeast cells are also employed in several human-activities such as bread-making and lager-brewing. As a matter of fact, there is almost no attention paid to the difference in the proportionality constants depending on the yeast ploidy. This study presents information for cell size of haploid, diploid, triploid, and tetraploid yeasts with isogenic background, and describes their proportionality constants (k) corresponding to the molar extinction coefficient (ε) in the Beer–Lambert law. Importantly, it was found that the constants are inversely proportional to apparent cell diameters estimated by flow cytometric analysis. Although each cell property highly depends on genetic and environmental factors, a set of results obtained from yeast strains with different ploidy in the current study would serve as a major reference source for researchers and technical experts. Nature Publishing Group UK 2023-01-27 /pmc/articles/PMC9883461/ /pubmed/36707648 http://dx.doi.org/10.1038/s41598-023-28800-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Fukuda, Nobuo
Apparent diameter and cell density of yeast strains with different ploidy
title Apparent diameter and cell density of yeast strains with different ploidy
title_full Apparent diameter and cell density of yeast strains with different ploidy
title_fullStr Apparent diameter and cell density of yeast strains with different ploidy
title_full_unstemmed Apparent diameter and cell density of yeast strains with different ploidy
title_short Apparent diameter and cell density of yeast strains with different ploidy
title_sort apparent diameter and cell density of yeast strains with different ploidy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9883461/
https://www.ncbi.nlm.nih.gov/pubmed/36707648
http://dx.doi.org/10.1038/s41598-023-28800-z
work_keys_str_mv AT fukudanobuo apparentdiameterandcelldensityofyeaststrainswithdifferentploidy