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No need for a gold-standard test: on the mining of diagnostic test performance indices merely based on the distribution of the test value
BACKGROUND: Diagnostic tests are important in clinical medicine. To determine the test performance indices — test sensitivity, specificity, likelihood ratio, predictive values, etc. — the test results should be compared against a gold-standard test. Herein, a technique is presented through which the...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9885658/ https://www.ncbi.nlm.nih.gov/pubmed/36717791 http://dx.doi.org/10.1186/s12874-023-01841-8 |
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author | Habibzadeh, Farrokh Roozbehi, Hooman |
author_facet | Habibzadeh, Farrokh Roozbehi, Hooman |
author_sort | Habibzadeh, Farrokh |
collection | PubMed |
description | BACKGROUND: Diagnostic tests are important in clinical medicine. To determine the test performance indices — test sensitivity, specificity, likelihood ratio, predictive values, etc. — the test results should be compared against a gold-standard test. Herein, a technique is presented through which the aforementioned indices can be computed merely based on the shape of the probability distribution of the test results, presuming an educated guess. METHODS: We present the application of the technique to the probability distribution of hepatitis B surface antigen measured in a group of people in Shiraz, southern Iran. We assumed that the distribution had two latent subpopulations — one for those without the disease, and another for those with the disease. We used a nonlinear curve fitting technique to figure out the parameters of these two latent populations based on which we calculated the performance indices. RESULTS: The model could explain > 99% of the variance observed. The results were in good agreement with those obtained from other studies. CONCLUSION: We concluded that if we have an appropriate educated guess about the distributions of test results in the population with and without the disease, we may harvest the test performance indices merely based on the probability distribution of the test value without need for a gold standard. The method is particularly suitable for conditions where there is no gold standard or the gold standard is not readily available. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-023-01841-8. |
format | Online Article Text |
id | pubmed-9885658 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-98856582023-01-30 No need for a gold-standard test: on the mining of diagnostic test performance indices merely based on the distribution of the test value Habibzadeh, Farrokh Roozbehi, Hooman BMC Med Res Methodol Research BACKGROUND: Diagnostic tests are important in clinical medicine. To determine the test performance indices — test sensitivity, specificity, likelihood ratio, predictive values, etc. — the test results should be compared against a gold-standard test. Herein, a technique is presented through which the aforementioned indices can be computed merely based on the shape of the probability distribution of the test results, presuming an educated guess. METHODS: We present the application of the technique to the probability distribution of hepatitis B surface antigen measured in a group of people in Shiraz, southern Iran. We assumed that the distribution had two latent subpopulations — one for those without the disease, and another for those with the disease. We used a nonlinear curve fitting technique to figure out the parameters of these two latent populations based on which we calculated the performance indices. RESULTS: The model could explain > 99% of the variance observed. The results were in good agreement with those obtained from other studies. CONCLUSION: We concluded that if we have an appropriate educated guess about the distributions of test results in the population with and without the disease, we may harvest the test performance indices merely based on the probability distribution of the test value without need for a gold standard. The method is particularly suitable for conditions where there is no gold standard or the gold standard is not readily available. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-023-01841-8. BioMed Central 2023-01-30 /pmc/articles/PMC9885658/ /pubmed/36717791 http://dx.doi.org/10.1186/s12874-023-01841-8 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Habibzadeh, Farrokh Roozbehi, Hooman No need for a gold-standard test: on the mining of diagnostic test performance indices merely based on the distribution of the test value |
title | No need for a gold-standard test: on the mining of diagnostic test performance indices merely based on the distribution of the test value |
title_full | No need for a gold-standard test: on the mining of diagnostic test performance indices merely based on the distribution of the test value |
title_fullStr | No need for a gold-standard test: on the mining of diagnostic test performance indices merely based on the distribution of the test value |
title_full_unstemmed | No need for a gold-standard test: on the mining of diagnostic test performance indices merely based on the distribution of the test value |
title_short | No need for a gold-standard test: on the mining of diagnostic test performance indices merely based on the distribution of the test value |
title_sort | no need for a gold-standard test: on the mining of diagnostic test performance indices merely based on the distribution of the test value |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9885658/ https://www.ncbi.nlm.nih.gov/pubmed/36717791 http://dx.doi.org/10.1186/s12874-023-01841-8 |
work_keys_str_mv | AT habibzadehfarrokh noneedforagoldstandardtestontheminingofdiagnostictestperformanceindicesmerelybasedonthedistributionofthetestvalue AT roozbehihooman noneedforagoldstandardtestontheminingofdiagnostictestperformanceindicesmerelybasedonthedistributionofthetestvalue |