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Colorimetry-Based Phosphate Measurement for Polymerase Elongation

DNA detection, which includes the measurement of variants in sequences or the presence of certain genes, is widely used in research and clinical diagnosis. Both require DNA-dependent DNA polymerase-catalyzed strand extension. Currently, these techniques rely heavily on the instruments used to visual...

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Autores principales: Yang, Han, Ji, Xiaoxin, Li, Xiao, Feng, Yunran, Zhang, Ke, Guo, Xuemin, Zhong, Zhixiong, Mu, Xin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9886478/
https://www.ncbi.nlm.nih.gov/pubmed/36726843
http://dx.doi.org/10.1155/2023/8296847
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author Yang, Han
Ji, Xiaoxin
Li, Xiao
Feng, Yunran
Zhang, Ke
Guo, Xuemin
Zhong, Zhixiong
Mu, Xin
author_facet Yang, Han
Ji, Xiaoxin
Li, Xiao
Feng, Yunran
Zhang, Ke
Guo, Xuemin
Zhong, Zhixiong
Mu, Xin
author_sort Yang, Han
collection PubMed
description DNA detection, which includes the measurement of variants in sequences or the presence of certain genes, is widely used in research and clinical diagnosis. Both require DNA-dependent DNA polymerase-catalyzed strand extension. Currently, these techniques rely heavily on the instruments used to visualize the results. This study introduced a simple and direct colorimetric method to measure polymerase-directed elongation. First, pyrophosphate (PPi), a by-product of strand extension, is converted into phosphate (Pi). Phosphate levels were measured using either Mo-Sb or BIOMOL Green reagent. This study showed that this colorimetry can distinguish single-base variants and detect PCR products in preset stringent conditions, implicating the potential value of this strategy to detect DNA.
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spelling pubmed-98864782023-01-31 Colorimetry-Based Phosphate Measurement for Polymerase Elongation Yang, Han Ji, Xiaoxin Li, Xiao Feng, Yunran Zhang, Ke Guo, Xuemin Zhong, Zhixiong Mu, Xin Biomed Res Int Research Article DNA detection, which includes the measurement of variants in sequences or the presence of certain genes, is widely used in research and clinical diagnosis. Both require DNA-dependent DNA polymerase-catalyzed strand extension. Currently, these techniques rely heavily on the instruments used to visualize the results. This study introduced a simple and direct colorimetric method to measure polymerase-directed elongation. First, pyrophosphate (PPi), a by-product of strand extension, is converted into phosphate (Pi). Phosphate levels were measured using either Mo-Sb or BIOMOL Green reagent. This study showed that this colorimetry can distinguish single-base variants and detect PCR products in preset stringent conditions, implicating the potential value of this strategy to detect DNA. Hindawi 2023-01-23 /pmc/articles/PMC9886478/ /pubmed/36726843 http://dx.doi.org/10.1155/2023/8296847 Text en Copyright © 2023 Han Yang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Yang, Han
Ji, Xiaoxin
Li, Xiao
Feng, Yunran
Zhang, Ke
Guo, Xuemin
Zhong, Zhixiong
Mu, Xin
Colorimetry-Based Phosphate Measurement for Polymerase Elongation
title Colorimetry-Based Phosphate Measurement for Polymerase Elongation
title_full Colorimetry-Based Phosphate Measurement for Polymerase Elongation
title_fullStr Colorimetry-Based Phosphate Measurement for Polymerase Elongation
title_full_unstemmed Colorimetry-Based Phosphate Measurement for Polymerase Elongation
title_short Colorimetry-Based Phosphate Measurement for Polymerase Elongation
title_sort colorimetry-based phosphate measurement for polymerase elongation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9886478/
https://www.ncbi.nlm.nih.gov/pubmed/36726843
http://dx.doi.org/10.1155/2023/8296847
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