Cargando…
Evaluating impacts of syntenic block detection strategies on rearrangement phylogeny using Mycobacterium tuberculosis isolates
MOTIVATION: The phylogenetic signal of structural variation informs a more comprehensive understanding of evolution. As (near-)complete genome assembly becomes more commonplace, the next methodological challenge for inferring genome rearrangement trees is the identification of syntenic blocks of ort...
Autores principales: | Elghraoui, Afif, Mirarab, Siavash, Swenson, Krister M, Valafar, Faramarz |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9887090/ https://www.ncbi.nlm.nih.gov/pubmed/36637196 http://dx.doi.org/10.1093/bioinformatics/btad024 |
Ejemplares similares
-
SMRT genome assembly corrects reference errors, resolving the genetic basis of virulence in Mycobacterium tuberculosis
por: Elghraoui, Afif, et al.
Publicado: (2017) -
Structure-Aware Mycobacterium tuberculosis Functional Annotation Uncloaks Resistance, Metabolic, and Virulence Genes
por: Modlin, Samuel J., et al.
Publicado: (2021) -
Log Transformation Improves Dating of Phylogenies
por: Mai, Uyen, et al.
Publicado: (2020) -
Atypical Genetic Basis of Pyrazinamide Resistance in Monoresistant Mycobacterium tuberculosis
por: Modlin, Samuel J., et al.
Publicado: (2021) -
Novel katG mutations causing isoniazid resistance in clinical M. tuberculosis isolates
por: Torres, Jessica N, et al.
Publicado: (2015)