The complete chloroplast genome sequence of Rubus irritans Focke 1910 (Rosaceae)

Rubus irritans Focke is a type of tonifying kidney-essence herb used in China. We present the complete chloroplast (cp) genome of R. irritans, a member of the genus Rubus. The complete cp genome of R. irritans was 155,286 bp long and consisted of an 84,613 bp long large single-copy (LSC) region, an...

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Detalles Bibliográficos
Autores principales: Han, YongXia, Tong, Li, Zhang, ZongHao, Yang, ShiBing, Yang, Fang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2023
Materias:
Plastome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9888452/
https://www.ncbi.nlm.nih.gov/pubmed/36733273
http://dx.doi.org/10.1080/23802359.2023.2168113
Descripción
Sumario:Rubus irritans Focke is a type of tonifying kidney-essence herb used in China. We present the complete chloroplast (cp) genome of R. irritans, a member of the genus Rubus. The complete cp genome of R. irritans was 155,286 bp long and consisted of an 84,613 bp long large single-copy (LSC) region, an 18,697 bp long SSC region, and a pair of 25,988 bp long inverted repeats (IR). Furthermore, the plastid genome contained 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the genome was 37.29%. Based on the complete cp genome, phylogenetic analysis revealed that R. irritans is closely related to R. amabilis.

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